Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5698 ATGGCTTCAAACAACACTCAACTTCAATTTCAAGACTCATTACCTTTGATGGCAAACAAGCTTGGTGGAGATGGACTAATAGACGAGCTTTGCAACGGGTTCAATCTCTTGATGGACTCTAGTAAAGGGGTTATCACCTTTGAAAGCCTCAAGAGGAATTCATCTTTGTTTGGATTACAGGATTTAAGCGATGAGGAACTGAGAAACATGATTGTGGAAGGTGATTTTGATGGTGATGGCGCTCTTAGTCAGTTGGAGTTTTGTGTTTTGATGTTTAGACTTAGTCCTGAACTCATGGATGGGTCTAAGTTGTGGTTGGAACAAATGCTTCAACAAGAGATGAAAGATTTTTTCTAA 357 0.395 MASNNTQLQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSSKGVITFESLKRNSSLFGLQDLSDEELRNMIVEGDFDGDGALSQLEFCVLMFRLSPELMDGSKLWLEQMLQQEMKDFF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5698 118 SUPERFAMILY EF-hand 3 91 IPR011992 -
Psa5g5698 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 117 - -
Psa5g5698 118 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Psa5g5698 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Psa5g5698 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 117 IPR044205 GO:0005509
Psa5g5698 118 Gene3D - 8 117 - -
Psa5g5698 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5698 Psa-Chr5 495788481 495789896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5698 5 113 EF-hand Containing Proteins AT5G54490 62.727 2.86e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5698 K24345 - gmx:100500465 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5698 5 495788481 495789896 Psa5g5698 5 495788481 495789896 ECH