Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5694 ATGGATAACTTCAACGTGCTAGTCTATTGCTTTCTTCACTTCCACTTCATACCAACCTCCAATACCTTGGAAACCATTCTACCAGGACAATCAATCAAAGGTAATGAAACTCTAATCTCAGCAGATGGAACTTTTGAAGCTGGTTTCTTTAACTTTGATAATTCAAATAACCAATATTTTGGTATATGGTACAAGGACATTTCACCACGAACTGTTGTGTGGATAGCAAACCGAGATTCTGCAGTAGAAAACTCATTAGGAGTTTTGAATCTCACCGATAAAGGAACTCTTGTTATTGTTGATGATTCCAAAGGTGCTATGATATGGTCCTCTAACACATCAACAACAGGTGCAAACCCAATTCTGCAACTCTTGGAAAATGGAAACCTTGTTGTGAAAGATGAAACCAAACCAGATACTATTTTGTGGCGAAGTTTTGATTTTCCTGGTGACACTTTACTCCCTGGTATGAGAATCCGAAGCAGTTTGGTAAAAGGCGATTCTACAGGTTTGGTTTCGTGGAGAGATACGCAAGATCCTTCTACTGGTTTGTATTCATATCATATAGATACTAATGGTTTTCCTCAAGTAGTGACTACTAGAGGAAACACATTATTGAATCGAGTTGGTTCTTGGAATGGATATAGTTTATCTGGAAGTTCGTCTCCGGATCTTTTAAAATCATTTAATATCACTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGAACTTTTGCACAACTCAGTTCTTTCAAGGTATATGCTTAATTCGATGGGACAAGTAACGCAGTTCTCGCTGTCGGATGATAGAAAAAGTTGGCAAATTCTCTTCATTGGCCCATCGGATCTGTGTGACAATTATGCTTACTGTGGTACAAATTCTAACTGTGATGCTGATAATTCTCCAATATGTGAATGTCTTGACGGTTTCATTCCAAAATCTCGAGAAAAATGGAATCCGCAAAATTGGACTGATGGTGGTTGTGCTAGGAGAGTGAAGTTAGATTGTGGTAATATTAGTAGTATTAGTAGTGACGGTTTTTTGAAACTTGTGGGAATGAAGCTGCCAGATACATCAAAATCTTGGTTTAACAAGAGCATAAACCTTGAAGAATGTGAAAGATTGTGTTTAAGAAACTGTTCTTGCACAGCTTATCTCTTGAAACATAAAAGACCTATCTGTATACATCTCAATATCTCTGCTTCTGCTACAACAATCGAATCGCTCAGAG 1237 0.3743 MDNFNVLVYCFLHFHFIPTSNTLETILPGQSIKGNETLISADGTFEAGFFNFDNSNNQYFGIWYKDISPRTVVWIANRDSAVENSLGVLNLTDKGTLVIVDDSKGAMIWSSNTSTTGANPILQLLENGNLVVKDETKPDTILWRSFDFPGDTLLPGMRIRSSLVKGDSTGLVSWRDTQDPSTGLYSYHIDTNGFPQVVTTRGNTLLNRVGSWNGYSLSGSSSPDLLKSFNITFVITEKEVSYGYELLHNSVLSRYMLNSMGQVTQFSLSDDRKSWQILFIGPSDLCDNYAYCGTNSNCDADNSPICECLDGFIPKSREKWNPQNWTDGGCARRVKLDCGNISSISSDGFLKLVGMKLPDTSKSWFNKSINLEECERLCLRNCSCTAYLLKHKRPICIHLNISASATTIESLR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5694 412 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Psa5g5694 412 Pfam D-mannose binding lectin 71 175 IPR001480 -
Psa5g5694 412 SUPERFAMILY Hairpin loop containing domain-like 347 402 - -
Psa5g5694 412 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Psa5g5694 412 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Psa5g5694 412 SMART blect_4 29 149 IPR001480 -
Psa5g5694 412 ProSiteProfiles PAN/Apple domain profile. 338 412 IPR003609 -
Psa5g5694 412 CDD B_lectin 30 149 IPR001480 -
Psa5g5694 412 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 387 - -
Psa5g5694 412 CDD PAN_AP_plant 334 387 - -
Psa5g5694 412 Pfam PAN-like domain 345 390 IPR003609 -
Psa5g5694 412 PIRSF SLG 3 410 IPR035446 -
Psa5g5694 412 Gene3D - 19 146 IPR036426 -
Psa5g5694 412 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5694 Psa-Chr5 495530061 495531492 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5694 - - ccaj:109805721 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5694 5 495530061 495531492 Psa5g5694 5 495530061 495531492 ECH