Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5692 ATGGAATTGGATAATTTTGGTATGGATTTTGAGGACTACTTTCCATCCATGATTGGAAGTTTAGGAGCAGAAGGGTTTATTGGAGAACTTTGCAATGGGTTTCGTTTGCTCATGGATGTGAACAAAGGTCTTATAACATTTGAAAGCTTGAAGGTGAATTGTTTCATGCTTGGTTTGGAGGTTAGGGATGATGAACTCTTGTGCATGCTAATGGAAGGTGATTTAGATGGAGATGGTGCTTTGAATCAAATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGTTTAATGGATGGACCTAAAATGTGCACTAATACTCATCAAGGTGTGGATCCAATGTTAATGTAA 351 0.3789 MELDNFGMDFEDYFPSMIGSLGAEGFIGELCNGFRLLMDVNKGLITFESLKVNCFMLGLEVRDDELLCMLMEGDLDGDGALNQMEFCILMFRLSPCLMDGPKMCTNTHQGVDPMLM* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5692 116 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Psa5g5692 116 PANTHER CALCIUM-BINDING PROTEIN KIC 1 107 IPR044205 GO:0005509
Psa5g5692 116 Pfam EF-hand domain pair 42 92 IPR002048 GO:0005509
Psa5g5692 116 Gene3D - 8 110 - -
Psa5g5692 116 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 1 107 - -
Psa5g5692 116 SUPERFAMILY EF-hand 24 96 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5692 Psa-Chr5 495159857 495161238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5692 9 102 EF-hand Containing Proteins AT4G27280 61.458 6.48e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5692 K24345 - gmx:100794479 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5692 5 495159857 495161238 Psa5g5692 5 495159857 495161238 ECH