Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5682 ATGGCCATCGCCGGCCACCACAAACCGAACCCCGACGCCAACCTCTTCCGCCTTTGTCCTTTTTGGAGTTCTGGCAACACACAGAACCAATCCCAAGCAAACGCTCAAAAATCCCCCAAAACGGTGTCGTCTGTAGCGAGGTCGTTGTTACTACCTCCCCGCCGTAGACTCCGTCTTGACCCTTCCAATCACCTCTACTTTCCATATGAACCGGGTAAGCAGGTTAAAAGTGCTGTTCGATTAAAAAACACTAGCAAGTCTTGTGTTGCTTTCAAGTTTCAAACAACTGCACCAAAAAGTTGTTACATGCGGCCTCCTGGTGGCATTCTTGCACCTGGAGAAAGTGTTATTGCAACTGTGTTTAAATTTGTGGAACAACCTGAAAACAATGAAAAAATGTCAGACCAGAAGAACAAGGTCAAGTTCAAAATCATGAGTCTCAAAGTGAAAGAAGGGGTGGACTATGTGCCTGAGCTGTTTGATGAACAAAAGGATCTAGTTACAGTGGAACGAGTCTTGGGGGTTGTATTTTTAGATCCAGAACGACCAAGTCCAGCTTTGGAAAAACTGAAAAGACAATTGGCTGAAGCTGATGCTGCACTTGAAGCTCGGAAGAAGCCTGCTGTGGAGACAGGTCCTCGAGTTGCTGCTGAAGGTCTTGTCATTGATGAATGGAAAGAACGAAGGGAAAAGTACCTGGCCCGACAGCAAATTCAAACAGTAGAATCAGTGTAA 735 0.4585 MAIAGHHKPNPDANLFRLCPFWSSGNTQNQSQANAQKSPKTVSSVARSLLLPPRRRLRLDPSNHLYFPYEPGKQVKSAVRLKNTSKSCVAFKFQTTAPKSCYMRPPGGILAPGESVIATVFKFVEQPENNEKMSDQKNKVKFKIMSLKVKEGVDYVPELFDEQKDLVTVERVLGVVFLDPERPSPALEKLKRQLAEADAALEARKKPAVETGPRVAAEGLVIDEWKERREKYLARQQIQTVESV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5682 244 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 26 243 - -
Psa5g5682 244 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 26 243 IPR016763 GO:0005789
Psa5g5682 244 Gene3D Immunoglobulins 53 182 IPR013783 -
Psa5g5682 244 Pfam MSP (Major sperm protein) domain 57 164 IPR000535 -
Psa5g5682 244 SUPERFAMILY PapD-like 49 188 IPR008962 -
Psa5g5682 244 ProSiteProfiles Major sperm protein (MSP) domain profile. 56 178 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5682 Psa-Chr5 493311447 493314551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5682 - - gmx:100792909 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5682 5 493311447 493314551 Psa5g5682 5 493311447 493314551 ECH