Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5660 ATGAATGTGTTACGCAATAAATGCTTAATATTTGTTCTGTTATTATCTGTGTTTGTATCATCATGTGTGAGTATTAAGCAGACTTATGTAGATACTCAGACATGCACGAGCAGTTGGAGCCCTTGTTTTCTCAAGAAACTACCTTGCCCTTCTCAATGCCCTTCGAAATCGCCAGCTAACTCGAGAGACAAAGTTTGCTATCTTGCTTGTGATTCTCCTGTGTGCAAAACTCAGTGCAAAAGTCGCAAACCAAATTGTAACGGCCGTGGATCTGCATGCTTGGACCCTCGGTTTGTTGGCGCGGATGGCATTGTTTTCTACTTTCATGGAAGGAGGAATGAGCATTTCACCTTGGTATCTGATGTCAACCTTCAAATCAATGCTCGTTTTATCGGCCTTAGGCCGAAAGGGAGACCGAGGGATTATACTTGGATTCAAGCATTAGGAGTTCTCTTTGATTCTCACAACTTTTCTGTTGAGGCCACTCCATCAACAGTTTGGGATGATGAAGTTGACCATTTGAAGCTCTCTTACGACGGAAAGGAACTCGTAATCCCAGAAGGTCATCTTTCTACGTGGCAATCTGAGGAAAATCAACTTAGAGTTGAGAGAACATCGAACGAGAACGGTGTGATGGTTACAATCCCAGAAGTTGTTGAAATGTCTGTCAATGTGGTGCCTGTGACCAAGGAGGACAGTAGAATCCATAACTATCAGATTCCTGATGACGATTGTTTTCCTCATTTGGAAGTTCAGTTTAAATTCTATGGTTTATCGTCCAAAGTAGAAGGTGTTCTTGGTAGAACTTATCAGCCCGATTTTCAAAATCCGGCAAAGCCAGGCGTGGCAATGCCGGTTGTTGGAGGGGAAGACAAGTACAGAACCACGTCGCTTGTTTCAACCAACTGTAATGCTTGCATATTCTCTTCTGCTAAAGATTCTGAGCAGGAAGGATTGGAGATTATTGAATATGGTATGATGGATTGCACTGGAGGTGCCAGCAGTGGTAATGGTATAGTTTGCAGAAGATAA 1032 0.4283 MNVLRNKCLIFVLLLSVFVSSCVSIKQTYVDTQTCTSSWSPCFLKKLPCPSQCPSKSPANSRDKVCYLACDSPVCKTQCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRNEHFTLVSDVNLQINARFIGLRPKGRPRDYTWIQALGVLFDSHNFSVEATPSTVWDDEVDHLKLSYDGKELVIPEGHLSTWQSEENQLRVERTSNENGVMVTIPEVVEMSVNVVPVTKEDSRIHNYQIPDDDCFPHLEVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLVSTNCNACIFSSAKDSEQEGLEIIEYGMMDCTGGASSGNGIVCRR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5660 343 Pfam Root cap 252 308 IPR009646 -
Psa5g5660 343 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 5 343 - -
Psa5g5660 343 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Psa5g5660 343 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 5 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5660 Psa-Chr5 492321261 492323616 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5660 - - cit:102607270 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5660 5 492321261 492323616 Psa5g5660 5 492321261 492323616 ECH