Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5655 ATGGCGTCGGTTCACAGCACCGTCTCTCCGCAGAGCTTCTTACCTTCAATTTCCAAAGGAAAATCAAAACTGAATTCATCCATTCCCAAGGCGACAAACTTTCCGGCGTCGAGATTCTCCGTAAATCCGAATTTCTCGAGAACCAAACTGACGGTGGTAGCGACGAAATTATCGGCGGAGGAGTTCGACGTGATAGCTGTTCAGAGCGACGATATAACGGATCAGCAAGAAGGTTTGTTGGTGAGCCGTGCGGAAATGGAAGGTGGAGATGGTGAATTAACGACGCAGGTGAATGGATTTGGAGCGAATGAGGGTTTGTTGTCGTTGGAAGGGTTTCCTTCTTCTTCTGGTTTGGTTGGTAATGAGAATGAGGAGAGTATGGAGAAGCTTCTAGATAGGAGTATTAATGCTAGTATTGTTCTTGCTGCTGGTACTTTTGCTCTCACTAAGCTTCTTACCATTGATAGTGATTACTGGCATGGATGGACAATCTATGAGATAGTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCGGTATTAGCGAAGATGGTGATCAGTGGGGTTGTTTATTCAGTAGGAGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAGTTTGATCGTGCTCGGATGTTCAGATCAGGGCTTGTTGGTTTTGCTTTACATGGCTCTCTTTCTCATTATTATTATCAGTTTTGTGAGGAGCTATTTCCTTATAAAGAATGGTGGGTAGTTCCTGTCAAAGTTGCCTTCGATCAAACCGCATGGTCGGCTGTTTGGAATAGCATTTACTATACGGCTGTGGGGCTCCTGCGTTTTGATTCTCCAATCAATATTTTCAATGAATTGACGGCAACGTTTTTTCCCATGTTGACTGCGGGATGGAAGCTGTGGCCATTTGCTCATCTAATTACTTATGGTGTAATACCAGTTGAGCAAAGACTTCTTTGGGTGGATATGATCGAGCTTATTTGGGTGACCATACTTTCAACATATTCAAATGAAAAATCAGAAGCAAGAATCTCTTCGGTACCTATAGAAGAGAAATCCACTACATCCGAGGAGTCATGA 1104 0.4339 MASVHSTVSPQSFLPSISKGKSKLNSSIPKATNFPASRFSVNPNFSRTKLTVVATKLSAEEFDVIAVQSDDITDQQEGLLVSRAEMEGGDGELTTQVNGFGANEGLLSLEGFPSSSGLVGNENEESMEKLLDRSINASIVLAAGTFALTKLLTIDSDYWHGWTIYEIVRYAPQHNWSAYEEALKTNPVLAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFALHGSLSHYYYQFCEELFPYKEWWVVPVKVAFDQTAWSAVWNSIYYTAVGLLRFDSPINIFNELTATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDMIELIWVTILSTYSNEKSEARISSVPIEEKSTTSEES* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5655 367 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 104 364 IPR007248 GO:0016021
Psa5g5655 367 Pfam Mpv17 / PMP22 family 282 341 IPR007248 GO:0016021
Psa5g5655 367 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 104 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5655 Psa-Chr5 491774628 491779951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5655 179 354 Miscellaneous Gene Families AT2G14860 25.000 2.14e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5655 K13348 - gmx:100805057 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5655 5 491774628 491779951 Psa5g5655 5 491774628 491779951 ECH