LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g5647	ATGGATCCAAGTTCTTGTCTTGATCATGCGCTTTTTCAACTCACACCAACAAGAACAAGATGTGATTTGGTGATTGTTGCTGGTGGTGTGAGTGAAAGATTAGCTTCTGGGCTGTTAGAACCTTTTCTTTCTCACCTTAAATGTGCCAAAGATCAGATTTCAAAAGGGGGCTATTCCATCACACTACATCCAGTTGGTATATTTGCTCCATGGTTCACCAAAGCCACCCTGCAAAGGTTTGTTAGATTTGTAAGCACTCCAGAAGTTCTAGAGAGGTTTGTGACCATAGAAAAGGAGATTGTGCAGATTGAAGGTTCAGTTCAATCAAGTGAGGCAGAAGGAAATCTGTCATATGCTGAAGGGCGTGTCAAAAGGTCGACTAATTCCTCCAATCAAGACGGACATGAAGAGAATTCGAGGATTCGCCTTCAACGTGTTCTAGACAATCGTAAAGCTATGCTTTGTAAAGAACAAGCAATGGCCTATGCACGTGCTTTAGTTGCAGGATATTATCCAGAATCAATGGATGAGCTTATTTGTTTCGCCGATGCTTTTGGAGCTTCGCGTTTAAGGGAAGCTTGCTTGAATTTCTTAGAGCTATGCAAACAAAAGAATGAAGACAAGCTTTGGGTGGATGAGATCGCAGCCATGCAGGTGTCTTCTCAACCCGTGTTGCCTTACTTGCGAACATCTGGAATCGTACTTGCGGGTGAAGATGAGTCAACCCCAAGCCATGCCAGTTTGGACATTGGCCAAGATGATACCTTGCCAGCATCAGGTCAAACTCCGTCAACCGATGGAAGGGCTCAAATACCAAAGTCGTGGCCGAATCATCATCCGCAGTACATTCACAATTTTCAAGGTCATGCATTCCAACAAATGCCTCCATACCAAGGATATGTGTATCCTGGTATGCAGGTTCCTCCCTCTTCATATTTTCCGGGGAATATGCAATGGCCTCCAAACGAGGGTCGGTCTCACAATGATAAAACATCGTATAAGAAAAAGAAGAAGAAGAAAAACAAACAATCTCAAGTAGTGGAGCGCTCTGAAGAAGATGAATCAACTACATTGTCTGAGTCTAGCTACGAGAGTGATTCGGATGTTGATTCAAAGCAAAGCAAAAAGAACTCGTCAGCGGAGCGTATGCACAAAAAGAAGCATGGAAAGAAGTCCTCGCGGAAAGTAGTTATACGTAATATAAACTATATAACCTCTAAAGGAGATGGTGAAAAGGGTAGTGTCACAGACGGGAGTTTGTCGAACGAGGAAGAATTTATCAATGGAGATTCCTTGAAACACAAGGTAGAGGAAGCTGTTGCGTCTTTTGAGAAAAGAAACAAATCAAACCCACGTCACCATAAGAAACAACATACCGCAAAACACCTTGGCAGTGTAAATGATTCAACTGTTTCTGATTCCAATGGCATAAAAGACGGTAACAATTGGGATGCTTTCCAGAATCTTCTTTTGATAGACGAGGAAGATTCTACGCGTGATACAGAAAAACAGCCGATGAAGTTTGAGGAAGAGTATATGCTGAACAAAAATTTTGAAGATGGAAGGTCAAAGGAATTTAACAGCGAAGCAGGCTTTGCTAAAACTCGAGTAGTTTCAAATGATTCATTTGTTGTGACACAAAGGGAATTGAACAATGAGGGTCGAAATCGCGTTGAATACTTCAAGGAAGGGAAGGATGAACCTACATTTATGCAGAAAAATAAAAGTACCGAAGAGGATTTGATGTTTTCTCGGAGAAACGAAGAACCTGGTAGATATTATGTGTCTTCTTCAGCTACAGATGGTTTACCTTTAGAGAAAAACAAGAAAGACATTTTGGCTGACGACTCTTTCATGATTCAAGCTCGATCGTCGGAAACTAAATCTAATTCCCAATCAGTTGTTAACATAAGTTCGGTATCAGACATTGTCGGCACTACTGAATTCACAAACGGAACACAAGAAGGTTCACACAAGAAGTCTGAAACCTTAACTTCTCGCGAGCCGGATGATCTCCTGATGGTTCTTGATCGCGATTCAGCTGTGGAGCAGAATGCAACACCCTGGAGAATGGAAATGGATTATGAAAACAACATTGCATTATCTGAAGCAAATAAAAAGCCTTCTGACGTTGGAACCGATAGAAACCGTGCGTCTGATCATGAAGGCGCGGATAAGAAAACTAGTGGAGCAAAAAATGGGAAAATTTCAAGTAAAGATGCAAAGTCAAAGGCTCCAAATGCATCTCTTGGGAAAAGCAAGTCTGATATCATGTCAAGAAGTAGAACATTGCCGGGAAGCAGAACTACGGTTACGAAGAGCAAATCCGAGAAGGAAGAAGAAACTAGAAAGAGACGGGAAGAGTTAATGATCCAACGACAGAAAAGAATCGCCGAAAGAAGTTCCTCGAAGAAGACTGGAACAGAAACTAAGAAAGGGAATCCTAAGATTCATCCATCTAACGAAGAGACTAAGAAATCGAACAAACCAGTCCTTAGGAGTTCCACCATCAATCGCCTCGCTACTGCCCGAGTAACTCAGCAGAAGGTTTCTCCGAGCCAACCAAAATCAAGTCCAGCCAAGAAACCTTCCTTGAAGGCAAATAAGGTGCCTTTGCAGAAGAAACAGCTCCCAAAAGAAGTCAAATCTTCGAATCCTAAAGCGAAAGTTCTATCCGACACTAACGCGAAGACTAAGATTGAAACAAAAGCCTCACTAGTGCTGCCTATCAAACCTGTTGCCGCGAAAGCTGTTGAACAAAACAACAACAATCATGATTTGAAAGTCATTGAAGAGGTATCCAAGGCATCACCAGAGAAACATCCAAGATCTTTGATTTCAGAAAGAGAAACCCCGCATGAAAATATGCGCCACCTTCGCACGAACTCGTCTTTGCCAAATCACGATCATCCGTCCGGAGGAAACCAGTCTAGAGGTGAAGAAGTATCAGACAAGTTACCTTCACTTCATGGTGATAACATGATCACAGCTTCTTCTACTGCTGCATTACCTACCAAACCATTAATAGATGAAAGTTATGTTACTCCACCTAAAGTCTCGGAGATACAAATTTCTACACCTCCGCCGAGTAACCAAGAATCAATCCACAACAGGAAGAAATGGATCAATGAGGAGGAGGACTCTTCAAAAGCGGCGAAAGGATTCCGTAAGCTTCTCTTCTTTGGAAGAAGGAGCTGA	3198	0.4221	MDPSSCLDHALFQLTPTRTRCDLVIVAGGVSERLASGLLEPFLSHLKCAKDQISKGGYSITLHPVGIFAPWFTKATLQRFVRFVSTPEVLERFVTIEKEIVQIEGSVQSSEAEGNLSYAEGRVKRSTNSSNQDGHEENSRIRLQRVLDNRKAMLCKEQAMAYARALVAGYYPESMDELICFADAFGASRLREACLNFLELCKQKNEDKLWVDEIAAMQVSSQPVLPYLRTSGIVLAGEDESTPSHASLDIGQDDTLPASGQTPSTDGRAQIPKSWPNHHPQYIHNFQGHAFQQMPPYQGYVYPGMQVPPSSYFPGNMQWPPNEGRSHNDKTSYKKKKKKKNKQSQVVERSEEDESTTLSESSYESDSDVDSKQSKKNSSAERMHKKKHGKKSSRKVVIRNINYITSKGDGEKGSVTDGSLSNEEEFINGDSLKHKVEEAVASFEKRNKSNPRHHKKQHTAKHLGSVNDSTVSDSNGIKDGNNWDAFQNLLLIDEEDSTRDTEKQPMKFEEEYMLNKNFEDGRSKEFNSEAGFAKTRVVSNDSFVVTQRELNNEGRNRVEYFKEGKDEPTFMQKNKSTEEDLMFSRRNEEPGRYYVSSSATDGLPLEKNKKDILADDSFMIQARSSETKSNSQSVVNISSVSDIVGTTEFTNGTQEGSHKKSETLTSREPDDLLMVLDRDSAVEQNATPWRMEMDYENNIALSEANKKPSDVGTDRNRASDHEGADKKTSGAKNGKISSKDAKSKAPNASLGKSKSDIMSRSRTLPGSRTTVTKSKSEKEEETRKRREELMIQRQKRIAERSSSKKTGTETKKGNPKIHPSNEETKKSNKPVLRSSTINRLATARVTQQKVSPSQPKSSPAKKPSLKANKVPLQKKQLPKEVKSSNPKAKVLSDTNAKTKIETKASLVLPIKPVAAKAVEQNNNNHDLKVIEEVSKASPEKHPRSLISERETPHENMRHLRTNSSLPNHDHPSGGNQSRGEEVSDKLPSLHGDNMITASSTAALPTKPLIDESYVTPPKVSEIQISTPPPSNQESIHNRKKWINEEEDSSKAAKGFRKLLFFGRRS*	1066

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	740	771	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	932	1009	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	321	396	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	958	982	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	646	671	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	932	957	-	-
	Psa5g5647	1065	PANTHER	COP1-INTERACTING PROTEIN-RELATED	1	1065	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	708	739	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	240	269	-	-
	Psa5g5647	1065	Coils	Coil	333	353	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	830	861	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	114	140	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	702	895	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	114	128	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	245	269	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	443	469	-	-
	Psa5g5647	1065	PANTHER	COP1-INTERACTING PROTEIN 7	1	1065	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	379	395	-	-
	Psa5g5647	1065	MobiDBLite	consensus disorder prediction	772	829	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g5647	Psa-Chr5	491057531	491062943	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g5647	-		-	mtr:MTR_2g079850	1447.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa5g5647	5	491057531	491062943	Psa5g5647	5	491057531	491062943	ECH