Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5629 ATGGATCGGCTTCTCAAAGCTGCCAGAGCTTCCGGTTCTCTCAACCTCTCCAACCGCTCCCTCAGTGAAGTACCCGATGAGGTTTATCGGAACCTTGAAGGCGTCGGTGGAACTGATGATAAGTGGTGGGAGGCCGTGGAGCTTCAGAAACTCATTTTAGCTCACAATAGTATTGAGTTCTTAAAGGAAGATATCAGAAATTTAGGTTTTCTTATTGTGTTGAATCTTAGCCACAATAGTCTTTCTCAGCTGCCTGCCGCCATCGGAGAGCTACCTCAGTTGAAGATGTTGGATGTTTCGCATAATTTGTTGCTTAGTATCCCGGAGGAGATTGGATCAGTTGTGTCGCTTGTGAAATTTGATTGTTCAAATAATCAGCTCAAAGAACTTCCTAGCTCACTGGGAAGATGCTTGGATTTGTCGGATTTAAAGGGATCAAACAATCTTATTGCAAGCTTGCCTGAAGATTTAGCAAATTGTTCCAAAATGTCTAAGCTAGATATGGAGGGAAACAAGCTTACAGTGATATCCGAAAATATCATTTCATCATGGACAATGCTTACTGAATTAAATGCAGCAAAAAACTTGCTTAGTGGCATACCAGCCGGCATTGGAGGACTTTCACGTTTAATCCGTCTTGATCTCCATCAGAACAGAATTTCATCAATTCCTTCTTCAATCATTGGTTGTCATTCACTTGCAGAGTTTTATTTGGGGAATAATAATATTTCTACAGTACCAGTGGAAATAGGGGAACTTTCTCGGCTCGGGACATTGGATCTGCAATCTAACCAGCTGAAAGAGTATCCTGTGGAGGCATGCAAATTGAGTCTTTTAGTCTTGAATCTTTCAAATAATTCACTGAGTGGGTTGCCTCCTGAAATGGGCAAGATGACTAGCTTGAGGAAACTTCTGCTTAGTGGGAACCCATTGCGGTCTCTTCGAAGCTCATTAGTCACTGGACCTACACCAGCGTTACTAAGATTTCTCCGAAGTAGACTTTCTGAAGATTCTGAAGCTGTAACCACATCAAAAAAAGACATAATTGCAATGGCTACCCGGTTATCTATCACTTCAAAGGAATTTTCTATGGGAGGGCTGGGGTTGAGTGCTATTCCATCAGAAGTATGGGAATCAGAGGAGGTCATAAAACTTGATCTTTCCAAAAACTCAATCCAGGAATTGCCAGTTGAACTTTCTTCTTGTGTTTCTCTCCAGACATTGATTTTATCAAAGAATCAAATTAAAGACTGGCCAGGTTCAATTCTTCAATCACTTTCGAGTCTGTCTTGTTTGAAGCTGGACTACAACCCCCTCGGACAGATACCTTCAAATGGTTTTGAAGTGGTGCCTAAGCTTCAGATCCTGGATCTAAGTGGTAACACAGGTTCATTACTAGACAGTCCCGCATTTTCTAGTTTGCCAAACCTGCAAGAGCTTTACCTGAGAAAAACGGGTCTCGCTGAAGTCCCATCAGATATATTGGGATTGCGTCAACTACGGATCCTTGACTTGAGTCAGAATTCCCTTCAATCGGTTCCAGAGGGGCTAAAAAATATCACCTCTCTAGTGGAGCTTGACCTATCCGATAACAACATCTCTGCCCTTCCACCTGAGCTGGGTCTGCTAGAACCAAGTCTTCAGGCATTGAGACTTGATGGGAACCCACTTAGAAGCATTCGGAGGCCTATCTTGGATAAAGGTACTAAAGCTGTCCTGAAATATTTGATGGATAAATTGCCAGAGCAGTAG 1752 0.4252 MDRLLKAARASGSLNLSNRSLSEVPDEVYRNLEGVGGTDDKWWEAVELQKLILAHNSIEFLKEDIRNLGFLIVLNLSHNSLSQLPAAIGELPQLKMLDVSHNLLLSIPEEIGSVVSLVKFDCSNNQLKELPSSLGRCLDLSDLKGSNNLIASLPEDLANCSKMSKLDMEGNKLTVISENIISSWTMLTELNAAKNLLSGIPAGIGGLSRLIRLDLHQNRISSIPSSIIGCHSLAEFYLGNNNISTVPVEIGELSRLGTLDLQSNQLKEYPVEACKLSLLVLNLSNNSLSGLPPEMGKMTSLRKLLLSGNPLRSLRSSLVTGPTPALLRFLRSRLSEDSEAVTTSKKDIIAMATRLSITSKEFSMGGLGLSAIPSEVWESEEVIKLDLSKNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILQSLSSLSCLKLDYNPLGQIPSNGFEVVPKLQILDLSGNTGSLLDSPAFSSLPNLQELYLRKTGLAEVPSDILGLRQLRILDLSQNSLQSVPEGLKNITSLVELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRPILDKGTKAVLKYLMDKLPEQ* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5629 583 Gene3D Ribonuclease Inhibitor 272 330 IPR032675 -
Psa5g5629 583 Gene3D Ribonuclease Inhibitor 466 579 IPR032675 -
Psa5g5629 583 Gene3D Ribonuclease Inhibitor 177 271 IPR032675 -
Psa5g5629 583 Gene3D Ribonuclease Inhibitor 332 465 IPR032675 -
Psa5g5629 583 SUPERFAMILY L domain-like 42 318 - -
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 404 425 IPR001611 GO:0005515
Psa5g5629 583 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 213 583 - -
Psa5g5629 583 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 137 228 - -
Psa5g5629 583 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 132 - -
Psa5g5629 583 PRINTS Leucine-rich repeat signature 278 291 - -
Psa5g5629 583 PRINTS Leucine-rich repeat signature 497 510 - -
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Psa5g5629 583 PANTHER LRR RECEPTOR-LIKE KINASE 14 132 - -
Psa5g5629 583 PANTHER LRR RECEPTOR-LIKE KINASE 137 228 - -
Psa5g5629 583 PANTHER LRR RECEPTOR-LIKE KINASE 213 583 - -
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 499 520 IPR001611 GO:0005515
Psa5g5629 583 SMART LRR_bac_2 275 295 - -
Psa5g5629 583 SMART LRR_bac_2 68 87 - -
Psa5g5629 583 SMART LRR_bac_2 426 445 - -
Psa5g5629 583 SMART LRR_bac_2 207 226 - -
Psa5g5629 583 SMART LRR_bac_2 91 110 - -
Psa5g5629 583 SMART LRR_bac_2 114 133 - -
Psa5g5629 583 SMART LRR_bac_2 497 516 - -
Psa5g5629 583 SUPERFAMILY L domain-like 361 558 - -
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 209 230 IPR001611 GO:0005515
Psa5g5629 583 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Psa5g5629 583 Pfam Leucine rich repeat 428 485 IPR001611 GO:0005515
Psa5g5629 583 Pfam Leucine rich repeat 209 266 IPR001611 GO:0005515
Psa5g5629 583 Pfam Leucine rich repeat 47 104 IPR001611 GO:0005515
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 522 543 IPR001611 GO:0005515
Psa5g5629 583 SMART LRR_typ_2 277 297 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 497 519 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 520 543 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 207 230 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 46 67 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 91 113 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 545 567 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 253 276 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 403 425 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 114 137 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 380 402 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 298 321 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 474 496 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 450 473 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 160 183 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 426 449 IPR003591 -
Psa5g5629 583 SMART LRR_typ_2 68 89 IPR003591 -
Psa5g5629 583 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Psa5g5629 583 Gene3D Ribonuclease Inhibitor 1 176 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5629 68 557 Receptor kinase-like Gene Family AT4G08850 28.785 4.94e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5629 - - mtr:MTR_2g079560 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5629 5 490259920 490269815 Psa5g5629 5 490259920 490269815 ECH