Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5609 ATGACTGGAGTGTCATTGGGTCTACGAACAAGTAGCAATGGCTCTCTGCAGTTGATTCAGAATGGAAATGGTTTGCAGGTTCCCGTGCTTGTTCGTAGATCTTCAAAGGCGCTCCTTTATAACCCCAAAGAGAAAGAAAGGGGTTGCCCTTATATTTGTCGCCACCTTGGACGTGGCAGGGTTGCTATGCTTCTCATGCTTCTCTTTGCCCTTTTCATTTTTGTCTTTGGTTGCTTTACACTTTACAAAGGTGGAAACATTACTAGTGAAATTGAAAATACACGATCTCGTGCCTTTAGTAGCTATGATTTTTTAGGCCTTGATGAAGCAATAGGAACAAAGTTGAAGGATAGTAGTTCTACTAGAAAAACGCCGTTAACAAGTGAGTATAAAAGTACATTCAGGGATCATCCTGTTTCCCATATACAATCTTCATATGATTTGAAAGGAAAAATAGGGTCTTCCTTTACTGTGGGACATTATTGTGACCATTTTGCATATCCTCCTCCACTGGCTGATAGAAGAAGAACTGGACCACGCCCATGTCCTGTGTGCTATATGCCTGTGGAGAAAGCTATAGATAGTATGCCAAGTTCCCCATCAGAGTCTCCTATACTTCACACTCTCACATATGCGCATAATGAAAATATGTTTCCAACTGAACCAGAGGGTGGCTCTGATTTTGGTGGATACCCTACGATGGAAGAAAGGGATGCTTCTTTTGATATAAAAGAGACCATGAAAGTGCATTGCGGATTTGTCAAAGGAAGCAGACCTGGCCGCCTGACTGGGTTTGATTTTGATGAGGAAGATCTCTTAGAGTTGGATCAGTACCATGATATAATTGTTGCGTCTGCCATATTTGGAAACTATGATGTAATACAGCAGCCCAGGAACATCAGCATAGAAGCAAGGAGAACAATTCCTTTCTATATGTTTATTGACGAAGAGACAGAAATGTATATGAGAAATGCCAGTATTTTGGATAGCAGCAGGAGAGTTGGATTGTGGAGAATCATTGTTGTCCGGAATATTCCATATGCTGATTCTAGGCGTAATGGAAAGATTCCAAAACTTCTTCTTCACAGAATCTTCCCCAATATTCGATATTCAATTTGGATAGATGGGAAGCTTCAGCTCGTTGTTGACCCATATCAAGTTCTTGAAAGGTTCTTGTGGCGCCCAAATGCTACCTTTGCCATTTCAAGGCACTATAGGCGTTTTGACGTCTTCGTTGAGGCTGAGGCTAATAAAGTAGCTGGAAAATATGAAAATGCTTCCATTGATCGCCAAGTCCAATTTTATCAATACCATGATGGTTTAACTCATTATTCTAGGGCTAAACTTCCCATAACTAGCGATGTTCCTGAAGGTTGTGTTATCATTAGAGAACACATTCCAATTACAAATTTGTTTACCTGCTTATGGTTCAATGAAGTCGATCGCTTTACTTCCAGGGATCAGTTGAGCTTTTCCACGGTAAGAGACAAAATAATGGCAAAAGTTGATTGGAGTATCAATATGTTTCTGGATTGTGAAAGGCGAAACTTTGTGATACAGGCTTACCATAGAGACGTATTGGAGAACATGCCTCCTCCTCCAGTCATAGTCAGTCGTGTCATTCGACCTGTTTCCTATACTACTAACAAGTCTTCATCTTTGTTGAAGAAGACTCTTAGACGCGGAAGAGGAGATAGGAGATCAGGTTCTAGGCGTCATCGTAAAGTAGTAGACAATTTTCTTATGAACCAAATTTTAGTCTAA 1764 0.4059 MTGVSLGLRTSSNGSLQLIQNGNGLQVPVLVRRSSKALLYNPKEKERGCPYICRHLGRGRVAMLLMLLFALFIFVFGCFTLYKGGNITSEIENTRSRAFSSYDFLGLDEAIGTKLKDSSSTRKTPLTSEYKSTFRDHPVSHIQSSYDLKGKIGSSFTVGHYCDHFAYPPPLADRRRTGPRPCPVCYMPVEKAIDSMPSSPSESPILHTLTYAHNENMFPTEPEGGSDFGGYPTMEERDASFDIKETMKVHCGFVKGSRPGRLTGFDFDEEDLLELDQYHDIIVASAIFGNYDVIQQPRNISIEARRTIPFYMFIDEETEMYMRNASILDSSRRVGLWRIIVVRNIPYADSRRNGKIPKLLLHRIFPNIRYSIWIDGKLQLVVDPYQVLERFLWRPNATFAISRHYRRFDVFVEAEANKVAGKYENASIDRQVQFYQYHDGLTHYSRAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMAKVDWSINMFLDCERRNFVIQAYHRDVLENMPPPPVIVSRVIRPVSYTTNKSSSLLKKTLRRGRGDRRSGSRRHRKVVDNFLMNQILV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5609 587 Pfam Protein of unknown function (DUF616) 209 523 IPR006852 -
Psa5g5609 587 PANTHER DUF616 FAMILY PROTEIN 4 580 - -
Psa5g5609 587 PANTHER ALKALINE CERAMIDASE-RELATED 4 580 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5609 Psa-Chr5 489423509 489429521 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5609 - - gmx:100810918 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5609 5 489423509 489429521 Psa5g5609 5 489423509 489429521 ECH