Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5563 ATGATGATGACAATGGGAATCTTAAACATGGAAAAGAAATGGTTATTTCCACTCTTTGTTACTTCTGCTTTTTGTATGCTTTTTCTAGCAACATCCTTTAACATGGGACTCGTCTCGTCGTTTCATTCGATCAATTCACTTTTTTTTCTTCCATCAGACACACATAGAAACCAAAATTCTTCACTTGTTTTTGTTGAAAGAAAGATTTCCCCTGCTCCGGCTCCCGTTAAGACTTCGATCCCTCGTTTCGCTTATTTGATATCCGGTTCCAAGGGCGATTTGGAGAAGCTTTGGAGAACTCTTCACGCGCTTTATCATCCGTTAAACCATTACGTCCTTCATTTAGACCTCGAATCGCCGTTGGAGGAAAGGTTGGAACTTGCTTCTAGGGTTGAGAAACAACATATTTTCTCTGAGGTTGGCAATGTGTTTGTCATCCCGAAGGCTAATATGGTTACGTACCGTGGACCGACGATGGTTGCTAATACTCTTCATGCTTGTGCTATTTTGCTTAAGAGAAGTAAAGATTGGGATTGGTTTATTAATCTTAGTGCTTCCGATTATCCTCTTGTTACTCAAGATGATCTGTTATATGCTTTCTCAAATTTAGATAGAAGCCTTAGCTTCATCGACCATACAAGTCGGTTAGGATGGAAATTGGAGAAACGAGCAATGCCGTTAATAATTGATCCCGGGCTTTACCATTCAACAAAGAAGGATGTATTTTGGGTCAATCCGAAGAGAACTTTGCCAACTGCGTTTAAATTGTTTACCGGTTCAGCATGGATGGTTCTATCGCACGATTTCGTGGAATACGTCGTATGGGGTTGGGATAATCTACCAAGAACCCTTCTAATGTACTACACAAATTTCCTCTCTTCGCCCGAAGGCTACTTTCAAACCGTCGCATGCAATGTACCAGAGTTATCCAAAACGATCGTTAACACCGACCTGCATTATATTTCCTGGGACGTACCTCCTAAACAGCACCCTCACGTCCTTAACATAAACGACACGGACAAAATGATCGCGAGCGGAGCCGCCTTTGCTAGAAAATTCAAACAAGATGATCCGGCCATAGAGTTGATTGACAAAGATTATTTACGTAAGAGAAATGGATTATTCACGTTTGGTGGTTGGTGTTCTGGTAAACCGAAATGTACCGAGGTCGGGAACGTGTATAAGCTCAAACCCGGTCCGGGGGCTCAAAGGCTTCAACAACTTCTAGCTGGATTAACATTGAAGGCTAAATCTGGTGAGGATCAATGTAAATAG 1275 0.4188 MMMTMGILNMEKKWLFPLFVTSAFCMLFLATSFNMGLVSSFHSINSLFFLPSDTHRNQNSSLVFVERKISPAPAPVKTSIPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVLHLDLESPLEERLELASRVEKQHIFSEVGNVFVIPKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYAFSNLDRSLSFIDHTSRLGWKLEKRAMPLIIDPGLYHSTKKDVFWVNPKRTLPTAFKLFTGSAWMVLSHDFVEYVVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNVPELSKTIVNTDLHYISWDVPPKQHPHVLNINDTDKMIASGAAFARKFKQDDPAIELIDKDYLRKRNGLFTFGGWCSGKPKCTEVGNVYKLKPGPGAQRLQQLLAGLTLKAKSGEDQCK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5563 424 PANTHER OS01G0201100 PROTEIN 8 424 - -
Psa5g5563 424 PANTHER GLYCOSYLTRANSFERASE 8 424 IPR044610 GO:0015020
Psa5g5563 424 Pfam Core-2/I-Branching enzyme 83 342 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5563 Psa-Chr5 486349476 486352616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5563 5 424 Glycosyltransferase AT3G15350 66.824 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5563 - - gmx:100776045 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5563 5 486349476 486352616 Psa5g5563 5 486349476 486352616 ECH