Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5561 ATGGAAATCAGTTCTAGATTTCACCATGAAAGGGAGAATCCATCTCCCATGAACTCACCAAAAAGCAATGTAAGTAACTGTATGAGTAGCAGCAACAGCAACAATGGAATCCAAATTCAAACACCACCTCTCACTCCAAAAACAATCCCTAGATCTGATTCAAATCCTTACCCTACAACCTTTGTTCAAGCTGATACAACAACTTTCAAACAAGTTGTTCAAATGTTAACAGGTTCATCAGAAACAACAACCTCGACCACCACAACGACAACAACAACAACCTCAACCACAACAAGACCAAATCAAGATCTACCTCAACATCCAACAAGAAACTTCAACATACCTCCAATCAAAACAGCACCAAAGAAACAAGGTTTCAAGTTATATGAGAGAAGGAACAGTCTCAAGAACAGTGTTCTTATGCTCAACACCCTCATGCCAAATGTTTTACCTAGGAAACAACAACAACAGTATCAACAAGAGATTCTCTCTCCGAGCTTGCTTGATTTTCCTTCTCTTGCTCTTAGCCCTGTCACACCATTGAATGATGACCCTTTTGATAAATCTTCACCTTCATTGGGAAATTCATCCTCCGAAGAAGATAAAGCTATAGCTGAAAAAGGTTTCTATTTGCACCCCTCTCCTATTACTACACCAAGAGACTCAGAGCCACAGCTTTTGCCTCTCTTCCCTCTCTCTTCACCTAGACTCTCACAATCAAGTTCTTGA 729 0.4019 MEISSRFHHERENPSPMNSPKSNVSNCMSSSNSNNGIQIQTPPLTPKTIPRSDSNPYPTTFVQADTTTFKQVVQMLTGSSETTTSTTTTTTTTTSTTTRPNQDLPQHPTRNFNIPPIKTAPKKQGFKLYERRNSLKNSVLMLNTLMPNVLPRKQQQQYQQEILSPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSSSEEDKAIAEKGFYLHPSPITTPRDSEPQLLPLFPLSSPRLSQSSS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5561 242 MobiDBLite consensus disorder prediction 79 103 - -
Psa5g5561 242 Pfam VQ motif 56 82 IPR008889 -
Psa5g5561 242 MobiDBLite consensus disorder prediction 183 199 - -
Psa5g5561 242 MobiDBLite consensus disorder prediction 16 32 - -
Psa5g5561 242 MobiDBLite consensus disorder prediction 1 15 - -
Psa5g5561 242 MobiDBLite consensus disorder prediction 1 32 - -
Psa5g5561 242 MobiDBLite consensus disorder prediction 181 242 - -
Psa5g5561 242 PANTHER VQ MOTIF PROTEIN 1 241 - -
Psa5g5561 242 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 1 241 IPR039611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5561 Psa-Chr5 486125975 486129485 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5561 - - gmx:100818804 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5561 5 486125975 486129485 Psa5g5561 5 486125975 486129485 ECH