Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5552 ATGGGGAATCCCACTGCATCCTCTGAGATTGAAATTGATACTGATTTTAAGGTCCATGTGTTCTCTTCATCATCTGAGTTACTGGAAAAGCTTCATCAAACATGGAGTTCAGTGGAGAAACAACCATATCCAGCTATGTATTCTAGTGTCTATGGAGGTATCATACTTGATCCGGCAATGATGGTAATCCCCATAGATGATCACATGGTACATAGAGGCCATGGTGTGTTTGATACTGCTATTATTTTACAAGGATACCTCTATGAGTTGGATGTTCACCTTGACCGTTTCTTGAGATCGGCTTCCAAAGCGAAGATATCCTCGCCCTTTTCGCGATCGACTCTTCGAAGCATTCTAATCCAACTAACCGCGGTCTCAAAATGCAAGAAAGGAACATTAAGATACTGGTTAAGTGCAGGTCCTGGTGATTTCTTGCTGTCATCATCAGGATGTCCAAAACCTGCATTCTATGCAGTAGTCATTGATCATGATTTTTCTCAGTGCAAAGAAGGCGTGAAAGTGATAACTTCCAATGTAGCAATGAAGGCACCTTCGTTTGCCACAATGAAAAATGTGAACTATCTTCCTAATGTACTTTCGGTATTGGAAGCGGAAGAGAAAGGAGCGTTTAGTTCTGTGTGGATTGATGAGGTTGGTTATATCGCTGAAGGACCGAATGTGAATGTTGCTTTCGTAACTCGAGAAAAGGAACTTGTTATGCCTTGTTTTGATAATATATTGTCTGGTTGCACTGCGAAAAGGCTTCTTGAACTTGCACCAAAGTTGGTTGAACAAGGTGTTCTCAAAAGTGTGATAACTAGAAATCTGAGTGTTGAAGAAGCTAAAGGTGCTGCTGAAATGATGTATGTAGGTAGCACTCTTCCTGTGCTGCCTATCATCATGTGGGATGATCAACCAATTGGTGATGGTAAGGTTGGAGAATTAACAATGTTAGTTTCGGATCTGCTATGGGATGATATGGTAGCTGGCCCTGAGACACAGAGACTACTTGTTCCTTATGTTTAG 1026 0.4142 MGNPTASSEIEIDTDFKVHVFSSSSELLEKLHQTWSSVEKQPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILQGYLYELDVHLDRFLRSASKAKISSPFSRSTLRSILIQLTAVSKCKKGTLRYWLSAGPGDFLLSSSGCPKPAFYAVVIDHDFSQCKEGVKVITSNVAMKAPSFATMKNVNYLPNVLSVLEAEEKGAFSSVWIDEVGYIAEGPNVNVAFVTREKELVMPCFDNILSGCTAKRLLELAPKLVEQGVLKSVITRNLSVEEAKGAAEMMYVGSTLPVLPIIMWDDQPIGDGKVGELTMLVSDLLWDDMVAGPETQRLLVPYV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5552 341 Gene3D - 13 162 IPR043131 -
Psa5g5552 341 CDD ADCL_like 67 323 IPR017824 GO:0008696|GO:0030170|GO:0046656
Psa5g5552 341 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 8 339 - -
Psa5g5552 341 PANTHER AMINO-ACID AMINOTRANSFERASE 8 339 - -
Psa5g5552 341 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 51 328 IPR036038 GO:0003824
Psa5g5552 341 Pfam Amino-transferase class IV 75 299 IPR001544 GO:0003824
Psa5g5552 341 Gene3D - 163 331 IPR043132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5552 Psa-Chr5 483671973 483674210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5552 K18482 - gmx:100798871 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5552 5 483671973 483674210 Psa5g5552 5 483671973 483674210 ECH