Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5542 ATGGACACAGAAAAACAACATCGTACAACAAGTAACAATAGTAGCACAAGTGAACTCTTTGTTTGTTTCACTTCACGTTTGTCATCTTCATCCATGAAGCTCTCGTCTAAATCAATCTTAAGTCCAAGCCGTAGCAGAGACCAACCTCAGATATCACTTTCGTCTTCCTTGAGTAGAAGACTGAAGAGCAACGGAAGCATGAAAGGTGGTCAAGCTTCTCCAATGTTTCCAACTGGTGGAAAGAAAAGAGGGTGTGGTTTTGAGAATCCAGAGCCTTCTTCCCCGAAGGTAACTTGCATTGGACAGGTTAGAGTGAAGACAAAGAAACAAGGGAAGAAAATGAGGTCGAGATCAAAGAGAAGAGGTGAAGCTAGTTTTAGAAGAGGTGAAAATAATCCAGATCTAACTAGACAGAACAGTCAGAGTTTGTATCAGAATCATCAGAATATGCAACAAGAGTGTTTGAAACATAGGAATCAAAGATGGGTTCATTTGCCTTTGACTATATGTGAGGCTTTGAGAGAGTTTAGTTGTTTTTTTCCTTGTAGGTCTTCTTGTATGTCAAACAATGAGAGAGAGAAAGAGAAGGGTGAAGGTAGGTTTGAAGGAAGAGAAGGGGGAGGATCTGGTGGTGGGCATGGTAGAGAAGGTTCATGTGGAGCTGCATTTACTAGATGGTTGGTGGCTTATCAAGATGGGGATGGAAAGGGGAGAGGGATTGAGGTGATGATGGAGGAACATCATGAGGAGATGGAGATGATGGATGATGAGAAAAGTGAGAGGAGTTATAGTCAAAGGAGACATATTTTTGAAGATCTTGATATAGATGTGGTTGATGAGAAGATACAAGAGGAGTTTGGTGGTGAAGAGGAAGAAGAAGAAGTGAAAGGTAGAGTTAGTATTTGTGTTCCACCAAAGAATGCTCTTTTGTTGATGAGGTGTAGATCTGATCCTGTTAAAATGGCTGCTTTGGCTAACCGTTTTTGGGAATCACCTCTTCATAAAGAACAACAAGAACATGTTGAAGAAGAACAACATCATAAGAAAGTTGAAGAACAAGAGGAGCATAGTGGAGATGAAGATGAAGATGAAGTTGTTGAACATGAAGAACAAGTACAAGAAGGTTTTATTGACCAAAACATTGAGATGGAGGTAGTTGAAGAGGCACAACAACTAGTAGAAGTGGAGAAAGTGTCACAAGAAGAAGATAGCATTTGTGAAAGAGAAACACAAGCTATTGTGGAAAATCATGAAATTGAAAGCAAAACAAAGCTAGAAGTTGATGAAGAAACCATGGAAGAGGAAGAGAAAAGTGAAGATGGAAATGGAAATGCCATTGATGATGATGATGATAAAGTTGAAACCTTTACGTGTGTTTTACTTGATTCACATCATGCAGATCTTGAAAAACCAGAAACAGAAGAAACCCATCATGGAGAAGATGAAGAGAAACAAGAAAATGAAGAAAGTTCGGAACTTTCTTCTTCTTCTTCTTCTTCTTCACCTGAAATATCAGTAGCTTCTTCAGTACAAGAAAACGATGAAGCAGAAGTAGAATCAGAAAAAGTTTCAGCGGAGGAAGAAGAAGAGAAGGAACAACCACCGACCCATCAAGGATCCGACCCGGATATTGTTCCTATTGGGTCAATGGAGCGAGAAAATGGGTCAAAGAAAGAAGAGAGAGAAAGAGAAACGTTACCGGAATGCTTGTTATTGATGATGTGCGAGCCAAAACTTTCCATGGAAGTGTCTAAAGAAACATGGGTATGCAGCACCGATTTCATACGGTGGTTACCGGAGAGACCTGCCGGGAAGGTCGCCGGAGGAGAGAAGAGGGTTGTAGTGGAGTCTTCTACTTCGTGTTCTAAGCCGAAGGTTAAGGTGAAGCCTGTTCAGCCGTCGATGCAGCCGCCGAGGTCTTCGTGTTCTTTACCGGTGAACGGAAGTGGCGCCGTGATGTCGATGGCGACGATGATTGAGCAGAAGCTGGCGGGTTGCTCCAAATCTCGTAATGGGTATGAGCCGTTTGTTCTCACGCGCTGTAAGTCGGAGCCGATGAGGTCTGCGACTAAGCTTACGCCGGAGGCTTGTTTCTGGAACAATAGGAAACTTGAGCCGCATCCTCCTCAGACTTCGCTTGGAGTCGGCGCGCCGGCTGGTGTTGGGTTTTGA 2172 0.4277 MDTEKQHRTTSNNSSTSELFVCFTSRLSSSSMKLSSKSILSPSRSRDQPQISLSSSLSRRLKSNGSMKGGQASPMFPTGGKKRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRSRSKRRGEASFRRGENNPDLTRQNSQSLYQNHQNMQQECLKHRNQRWVHLPLTICEALREFSCFFPCRSSCMSNNEREKEKGEGRFEGREGGGSGGGHGREGSCGAAFTRWLVAYQDGDGKGRGIEVMMEEHHEEMEMMDDEKSERSYSQRRHIFEDLDIDVVDEKIQEEFGGEEEEEEVKGRVSICVPPKNALLLMRCRSDPVKMAALANRFWESPLHKEQQEHVEEEQHHKKVEEQEEHSGDEDEDEVVEHEEQVQEGFIDQNIEMEVVEEAQQLVEVEKVSQEEDSICERETQAIVENHEIESKTKLEVDEETMEEEEKSEDGNGNAIDDDDDKVETFTCVLLDSHHADLEKPETEETHHGEDEEKQENEESSELSSSSSSSSPEISVASSVQENDEAEVESEKVSAEEEEEKEQPPTHQGSDPDIVPIGSMERENGSKKEERERETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPAGKVAGGEKRVVVESSTSCSKPKVKVKPVQPSMQPPRSSCSLPVNGSGAVMSMATMIEQKLAGCSKSRNGYEPFVLTRCKSEPMRSATKLTPEACFWNNRKLEPHPPQTSLGVGAPAGVGF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5542 723 MobiDBLite consensus disorder prediction 429 447 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 28 71 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 105 139 - -
Psa5g5542 723 Coils Coil 511 533 - -
Psa5g5542 723 PANTHER CHLOROPLAST PROTEIN HCF243 1 723 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 491 513 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 397 428 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 191 215 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 397 564 - -
Psa5g5542 723 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 723 - -
Psa5g5542 723 Coils Coil 333 353 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 106 122 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 28 77 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 335 355 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 448 484 - -
Psa5g5542 723 MobiDBLite consensus disorder prediction 335 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5542 Psa-Chr5 481431931 481435375 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5542 - - cam:101508279 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5542 5 481431931 481435375 Psa5g5542 5 481431931 481435375 ECH