Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5541 ATGCGAATTCCGATCAACCACCGATTCCGAAACCTCATCACACATTACTCCTCCAGTTCCCGCCACGTCTCCACCTGCAGAGCCGTTCTCCTCACCTCCTTCGGCGGAACTCACAACCTCCACATTCAACCCGACGTCGAAGTCCCCCCTCTCAAACCCGACGAAGTCCTCGTCCGCTCTCGCGCCGTTTCCGTCAATCCTTTAGACACTCGAATGCGTGCTGGTTATGGCCGTTCAATCTTTGAGCCGCTTCTGCCTTTGATTTTGGGCCGTGATGTAAGCGGCGAGGTGGCGGCGGTTGGGGATTCGGTCAAGTCGGTGAGTGTTGGACAACAGGTTTTTGGGGCTTTGCATCCAACTGCTATTAGAGGGACTTATGCTGACTATGCAATTCTTTCTCAAGATGAGGTTACTGTAAAACCAGATTCACTTTCTCATGTGGAAGCAAGTGCCATTCCTTTTGCTGCACTGACAGCTTGGCGTGCTCTGAGTGGTACTGCTAGAATAACTGAAGGGCAAAGGATATTAGTAGTGGGAGGTGGAGGAGCTGTAGGGTTTACTGCTATTCAGATTGCAGTAGCTGCTGGTTGCTCGGTCACAACTACTTGTGGACCTCAAAGCGTTGAGAGAATGTTAGCAGCCGGTGCTGAGCAAGCTGTTGATTATCTTTCTGAGAATTATGAATTGGCTATAAAGGGAAAGTTTGATGCTGTCTTGGACACAATTGGTGAGCCAGAGACAGAACACATGAGCATTAATTTTCTGAAAAAAGGTGGACGTTATATGACACTTCAGGGTGAAGCAGCGTCATTGTCTGATAGCTTTGGTCTGGCTCTTGGGCTCCCCGCAGCTACAGCTTATTTTTTGAAAAAACAGCTTGAGTACCGATTCGTAAATGAAATAGAATACTCATGGGTATTCATGAGGGCTGACTTAGACGGTTTGATTGAGATTCGAAAGCTATGTGAAGCAGGGAAGATGAAGATACCTGTTGATAAAACGTTTCCCATAACGCAAGTAAAAGAAGCTCACGATGCAAAAGACAGGAGAATCATTCAAGGTAAAGTGGTGCTAGAATTTGATTGA 1086 0.4715 MRIPINHRFRNLITHYSSSSRHVSTCRAVLLTSFGGTHNLHIQPDVEVPPLKPDEVLVRSRAVSVNPLDTRMRAGYGRSIFEPLLPLILGRDVSGEVAAVGDSVKSVSVGQQVFGALHPTAIRGTYADYAILSQDEVTVKPDSLSHVEASAIPFAALTAWRALSGTARITEGQRILVVGGGGAVGFTAIQIAVAAGCSVTTTCGPQSVERMLAAGAEQAVDYLSENYELAIKGKFDAVLDTIGEPETEHMSINFLKKGGRYMTLQGEAASLSDSFGLALGLPAATAYFLKKQLEYRFVNEIEYSWVFMRADLDGLIEIRKLCEAGKMKIPVDKTFPITQVKEAHDAKDRRIIQGKVVLEFD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5541 361 SMART PKS_ER_names_mod 35 358 IPR020843 GO:0016491
Psa5g5541 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 335 IPR036291 -
Psa5g5541 361 PANTHER PROTEIN AST1-RELATED 17 360 - -
Psa5g5541 361 Gene3D - 34 358 - -
Psa5g5541 361 PANTHER PROTEIN AST1-RELATED 17 360 - -
Psa5g5541 361 SUPERFAMILY GroES-like 23 176 IPR011032 -
Psa5g5541 361 Pfam Zinc-binding dehydrogenase 215 358 - -
Psa5g5541 361 Pfam Alcohol dehydrogenase GroES-like domain 53 115 IPR013154 -
Psa5g5541 361 Gene3D - 152 330 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5541 K23164 - gmx:100799923 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5541 5 481419557 481423240 Psa5g5541 5 481419557 481423240 ECH