Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5504 ATGGCGACCCAGATCTTCTCCCGGGTCATTCCCAAAACCCAAACCCTAGCTTCCTTCTTCTCTCGCTCACTCTCCACCACTACCACAATCACCGTCCCCTCTTCATCCGCCATCTCTCTCCTCCGCCGACTCCGTCCTCTTTCCGCTGCTTCCGTCGTCTCCCGCCGTGTCCTCCTTCTCCCTAACTCCTTCCGCTCTTTCTCCACACGCGCTACCACCTCCTCACTCAACGACCCTAATCCTAACTGGTCCAACCGTCCCCCAAAGGAAACCATCTTGCTCGATGGATGCGATTTCGAACACTGGCTTGTGGTTATGGAGAAGCCTGAAGGTGATCCCACAAGGGATGAAATTATTGATAGCTACATCAAAACACTGGCGCAGGTTATCGGTGGAAGTGAGGAAGAAGCAAGGATGAAGATATATTCTGTTTCAACTAGACACTACTTTGCTTTTGGAGCTCTTGTGTCTGAAGAGCTTTCCTACAAACTTAAAGAACTTCCCAAAGTTCGATGGGTTCTACCTGATTCATATTTGAATGTGAAGGAGAAAGATTATGGAGGTGAGCCCTTTATTAATGGGCAAGCTGTTCCTTATGATCCCAAGTACCATGAAGAGTGGGTTAGGAACAATGCCCGTGCAAATGAAAGGAACAGGCGCAATGACAGACCTCGTAATGCTGACAGGTCAAGAAACTTTGACAGAAGAAGGGAAAATGTGGTGAACAGAGATATGCAGACTAGGCCTCCAGTGCAGAATCCTGGGCCTAATATGGCTGGTCCACCTCACAATGCGGGTGGATTCCCTCCCAACAATGCGGGTGGATTTCCTCCCAACAATGCTGGTGGATTTCCTCCCAACAATGCTGGTGGGTTCCCTCCCAACAATGCAGGTGGATTCACTCCTAACAATGCTGGCGGGTACCCTCCTAACAATGCTGGCGGATATGCTCCAGCCCCTCCTAGCAATCAAGGTGGATACGCCCCTCCAAATGCAGGGTATGCCCCTCCAAATGCAGGCGGATATGCTCCTAACAACACAACTGGCGGTTACCCTCCTCCCAATATGGGTGGGCCTCCTCCTAACATGGGCAGACCCCCTCCTCCTCCTAACAGTGGATATGGTATGCCTCAAAATAACTACCCTGGCAACAATGGAGGCGTGCAACAAAATCCGAACATGGGAGGGTTGCCGCCAAATGCAGGATGGGGAAATAATCAGTAG 1224 0.5074 MATQIFSRVIPKTQTLASFFSRSLSTTTTITVPSSSAISLLRRLRPLSAASVVSRRVLLLPNSFRSFSTRATTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAQVIGGSEEEARMKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLNVKEKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNADRSRNFDRRRENVVNRDMQTRPPVQNPGPNMAGPPHNAGGFPPNNAGGFPPNNAGGFPPNNAGGFPPNNAGGFTPNNAGGYPPNNAGGYAPAPPSNQGGYAPPNAGYAPPNAGGYAPNNTTGGYPPPNMGGPPPNMGRPPPPPNSGYGMPQNNYPGNNGGVQQNPNMGGLPPNAGWGNNQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5504 407 MobiDBLite consensus disorder prediction 376 407 - -
Psa5g5504 407 MobiDBLite consensus disorder prediction 353 375 - -
Psa5g5504 407 MobiDBLite consensus disorder prediction 214 243 - -
Psa5g5504 407 MobiDBLite consensus disorder prediction 214 256 - -
Psa5g5504 407 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 11 299 IPR039206 GO:0016554
Psa5g5504 407 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL-LIKE 11 299 - -
Psa5g5504 407 MobiDBLite consensus disorder prediction 338 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5504 Psa-Chr5 476378854 476381386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5504 - - aprc:113854647 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5504 5 476378854 476381386 Psa5g5504 5 476378854 476381386 ECH