Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5468 ATGTCTTTTCCATTATTTCTCACTTTATTACTCTTATCTTTCTCCACTTTCATAGCTCAAGCCATAGTTCCACAAAATGAAACCTTCAAATTCGTCAACTCAGGTGAACTAGGACCATTCATAGTAGAATATGGAGCTGACTACAGAATGATAAGCATATTCAATGCTCCATTCCAAGTTGGTTTTTACAACACTACACCAAATGCTTACACTCTAGCCCTACGAATCGGACTCCGACGATCCGAACAACTTTTCCGATGGGTTTGGGAGGCTAACCGAGGCAACCCCGTCGACGAAAACGCAACATTTTCATTAACTACTAATGGAAACCTTGAATTAGCAAATTCCAATGGAAGACTTGTTTGGCAAACAAATACTTCTAACAAAGGTGTTGTTGCCTTTAGGTTACTCCCAAATGGTAACATGGTTTTAATTGATGCTAAAGGTAAATTCATTTGGCAAAGTTTTGATCATCCTACGGACACTCTTCTGGTGGATCAATATTTAAAGCCCAACGGGCCTTCGAAGCTCGTTAGCAGGCTTTCGGAGAAAGAAAATCTTGATGGGCCTTATAGTTTAGTTTTGGAGCCCAAAGGTTTGGCTTTATATTACAAAAGCAAAAACTCACCTAAGCCAATTCTCTATTGGCAATCCTCTCAACAAGGCTCATTAGAAAATGTTACACTCACATCTGATTCGGAGTCTTTTGAAATTAGGTTTGATACATTTTTTGGTACGCCAGTGAATAATAGTACCTTAACATATCTTAGGCTTGGAATTGATGGTAACATTAAATTTCACACATATTTTCTCGACGTTCGCGACGGTGTTTGGAAGGTTACATACACTCTCTTTGATAGAGATTTTGATGAGAGTGAGTGTCAATTACCAGAGAGATGTGGGAAATTTGGGCTTTGTGAGGATAATCAATGTGTTGGTTGTCCATTAGAGAATGGAGTTTTGGGTTGGAGCAATAAGTGTAGTCCTAAGCCTTTAGGGGTGTGTAAAGCAAGTGAGTTTCATTACTATAAAATTGAAGGAGTTGAACATTATATGAGCAAATATACAATTGGTGATAGAGTGAGTGAAGATGGTTGTGGAAGTAAATGTACAAAGGATTGCAAGTGTGTTGGGTATTTTTATCATAAGGATAATTCAAGGTGTTGGATAGCTTATGATTTGCAAACTCTTACTAGGGTTGCAAATGTTACACATGTGGGTTATGTTAAGGTGCCTAATAAGTAA 1245 0.3799 MSFPLFLTLLLLSFSTFIAQAIVPQNETFKFVNSGELGPFIVEYGADYRMISIFNAPFQVGFYNTTPNAYTLALRIGLRRSEQLFRWVWEANRGNPVDENATFSLTTNGNLELANSNGRLVWQTNTSNKGVVAFRLLPNGNMVLIDAKGKFIWQSFDHPTDTLLVDQYLKPNGPSKLVSRLSEKENLDGPYSLVLEPKGLALYYKSKNSPKPILYWQSSQQGSLENVTLTSDSESFEIRFDTFFGTPVNNSTLTYLRLGIDGNIKFHTYFLDVRDGVWKVTYTLFDRDFDESECQLPERCGKFGLCEDNQCVGCPLENGVLGWSNKCSPKPLGVCKASEFHYYKIEGVEHYMSKYTIGDRVSEDGCGSKCTKDCKCVGYFYHKDNSRCWIAYDLQTLTRVANVTHVGYVKVPNK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5468 414 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 219 IPR036426 -
Psa5g5468 414 Gene3D - 53 157 IPR036426 -
Psa5g5468 414 ProSiteProfiles PAN/Apple domain profile. 335 401 IPR003609 -
Psa5g5468 414 CDD PAN_AP_plant 338 412 - -
Psa5g5468 414 CDD B_lectin 42 159 IPR001480 -
Psa5g5468 414 SMART blect_4 42 159 IPR001480 -
Psa5g5468 414 PIRSF SLG 1 414 IPR035446 -
Psa5g5468 414 Pfam D-mannose binding lectin 88 173 IPR001480 -
Psa5g5468 414 ProSiteProfiles Bulb-type lectin domain profile. 26 157 IPR001480 -
Psa5g5468 414 PANTHER - 5 413 - -
Psa5g5468 414 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 5 413 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5468 - - gmx:100804561 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5468 5 473676257 473678622 Psa5g5468 5 473676257 473678622 ECH