Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5412 ATGGAATCAGTGAAACCATTAGCGGTAACACCAAGCAAGAAACTAGCTAGAAATTTTGCCAAAGTTCTTCATCTCAGAGCATTTTTGAAGAATGTTACTATATCTGAAACAAATCCAAAGGATGAAACAACTCCAATTAATTGGTCTGAATCGTTCAACAAGGTTGATGAAGATGAAGAGCTTCAAGAACAAAGAGTTGCAACAGAAGCACTTCTCGCGAAGGTTTTCGCCAGCGTTTCGACTGTTAAAGGCGCGTATGCTGAGCTACAGCATTTTCAATCACCTTTTGATCCTGATGGAATTGAAGCTTCTGATAAACTACTAGTTTCTGAGTTGAAGCATTTGTCTGAGCTGAAGCAGTGTTACTTGAAGAAACAATATGATCCTTCGCCGGAGAAAGCGATACTCGAAGCTGAATCGAAGGAGACAAAAGGTGTTATAAAAACCTATGAGATTACAGCGAAGAAGTTAGAGTCACAGGTAAGGCTCAAAACTTCTGAGATTATGTTTCTTAAAGAGAAATTAGTGGAAGCTAATAGTCATAACAAGTTAATCGAGAAGAGATTGAATCAAAGTGGATCGTTATCTTTATCTTCATCTTCGCTAGATAATAATGTTAACATATCAGGGTTAAGTCCTAGCCATTTTGCTAGCATTCTTCGTCATACTGTTAAATCGATTAGAAGCTTTGTGAGGTTAGTTGTCGATGAAATGAGATCTGCAAAATGGGATATCGATGCTGCTGTCGATGCTATTGAACACAATGTTGTTTACCTCATAGAAGATCACAAGTGTTTCGCAATCGAATCCTTTGTTTGCAAAGAAATGTTCGAGGCATTTCACTTCCCGAATTTCAATCTTCCAAACGAGTCGCTTCCGGATGACAGATCCAATCAACAAAACTGGTTCTTTCAGAGCTTCAACGAGCTGAAATCAGGGAAAGTTAAAGACTTTCTCTCCGTGAAACCACAATCATCGTTTGCCAAATTCTGCAGGAACAAGTATTTGAGACTCGTTCATCCGAAAATGGAGTCATCGTTTTTCGGAAACATGAATCACAGGAACTTTATAAGCAATGGAGAGTTTCCAAAAAGTGATTTTTTCACATCGTTTGCTGAAATGGCGAAAAGGGTTTATCTATTACATTGTTTAGCATACTCTTTTGAAGAACAAGCTGAGATTTTCCAAGTTTCAAAAGGGTGTAGATTTTCTGATGTGTACATGGAAAGTGTGAACGATGAAATGTTCATGTGTGCAAATTCAGACAAGACAACAACAATTGTTGAACCAGAAGAAGAACCTGTGGTTGGTTTCACTGTTGTTCCTGGTTTTAGGATTGGTAAAACTTTTTTACAGTGTCAAGTTTACCTCATGCAGAAGAAAAGTTCATATTTTCAATAA 1401 0.3769 MESVKPLAVTPSKKLARNFAKVLHLRAFLKNVTISETNPKDETTPINWSESFNKVDEDEELQEQRVATEALLAKVFASVSTVKGAYAELQHFQSPFDPDGIEASDKLLVSELKHLSELKQCYLKKQYDPSPEKAILEAESKETKGVIKTYEITAKKLESQVRLKTSEIMFLKEKLVEANSHNKLIEKRLNQSGSLSLSSSSLDNNVNISGLSPSHFASILRHTVKSIRSFVRLVVDEMRSAKWDIDAAVDAIEHNVVYLIEDHKCFAIESFVCKEMFEAFHFPNFNLPNESLPDDRSNQQNWFFQSFNELKSGKVKDFLSVKPQSSFAKFCRNKYLRLVHPKMESSFFGNMNHRNFISNGEFPKSDFFTSFAEMAKRVYLLHCLAYSFEEQAEIFQVSKGCRFSDVYMESVNDEMFMCANSDKTTTIVEPEEEPVVGFTVVPGFRIGKTFLQCQVYLMQKKSSYFQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5412 466 Pfam Plant protein of unknown function (DUF641) 65 188 IPR006943 -
Psa5g5412 466 Coils Coil 154 174 - -
Psa5g5412 466 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 457 IPR040225 GO:0009639|GO:0009959
Psa5g5412 466 PANTHER OS01G0203800 PROTEIN 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5412 Psa-Chr5 470216846 470221155 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5412 - - gmx:100810236 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5412 5 470216846 470221155 Psa5g5412 5 470216846 470221155 ECH