Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5382 ATGAACACTTCCCCTCAATTTTTCTTCCTTTCACTCATTGCCATATGGCTCATATCTCTAACTGCTTTTGGAGCTACTACTATTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTATATCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGTTTACGCCTCCCATACCCAAAATCTTAGAAAACAATGTAACCTGTAACTGCTCTGTTCCCGGGGACAACTTCTGTCATGTTACTATAATAAGTTTGAAAGGGCAAAATCTTCAAGGCACTCTTCCACGGGAACTGAACAGGTTGCAATACCTTCAAATTATTGACCTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGACAAATCTTCTAAACATTAATCTCCTTGGAAATCGATTAACGGGTTCAATACCGAAAGAGATTGCAAATATATCAACACTGATTCAGTTGGAGTTAACGGCCAATCAAATGTCTGGAAATATTACTTCTGAGCTTGGGAATCTACCCCAGATTCGAACACTGCGATTTTCCTCTAACAATTTTTCTGGAGAGCTACCTGCGACATTGGCCAAGCTCACTACATTGCAAGATTTCCAAATTTCGGACAACCAATTCTCGGGAAAGATACCCGATTTTATTCAGAACTGGACTAATATCAATACGCTAATCATTCAAGGGAGTGGATTAAGTGGACCAATTCCTTCCATAATTTCACTTTTGAGAAACTTAACTGATTTGAGAATTAGTGATTTAAATGGATCTGAATATGCACCTTTGCCACAACTTAATAATATGACATCGTTAAGCAAACTGATTCTAAGGAATTGCAACATCAATGGAACTCTACCTGAATACCTTAGGACTATGACATCATTAAAAATCTTAGATTTCAGCTTTAACAAATTCAGTGGAACAATTCCAAGTACCTACGCTGACATAAACAACGTTATGAACTACATATTTTTAACTGGAAACCTTCTCACTGGACCGATACCTCCTTGGAAAACGAACATCTACGTAGATCTTTCATACAATAACTTCAGCATCAGCCAAGGGAATCAGATATGTCAAAATGATAAAGTAAACTCGTTTTCTACCTCATGGGCAAACAAGAACATAGGAACAGTTTCGTGTTTGAGCGAATGCACCAAACCCTCCTACTCCCTTTATATAAACTGTGGTGGACAGCAAGAAACAGTTAACAGAACAAGTTATAATGGCGATTCAGATTCACCTGGACCAGCTAAATTCCATGTCAGTCCAACAGGAAATTGGGCATTTAGCACCACTGGTATATTCATTGATAGTGACCAACTCGGAGAAACTTATTCCCCACAAAATGTCACTACACTTACTATGGCAGATGCTGATTTATACATGAATGCCCGTGGTTCTGCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCAGAGATGACCAAACTTATGGTAGTCTTGGAAGACGTGTATTTGATATCTACCTTCAGGGAAAGCCGGTGCAAAAGGACTTCAATATTGCCATAGAAGCAGGAGGAGTTGGTAAGAAAGTCATAAAACCGTTCAAAGATGTTGTTGTTACAAGTAATACCTTGGAGATTCGTTTGTATTGGGCTGGAAAAGGGACACAGTCTCTCCCAAATAGATCAGTATTTGGTCCTCTTATATCTGCCATATCAGTGGAATCTGACTCTCCACCTGGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCAGCAACAATTGTTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGGAAAGAAAAACTCATTAGCAAAAG 1903 0.3894 MNTSPQFFFLSLIAIWLISLTAFGATTIHPDEKKALEDIAISLGKKDWNFDIDPCSNKPNWFTPPIPKILENNVTCNCSVPGDNFCHVTIISLKGQNLQGTLPRELNRLQYLQIIDLSRNYLNGTIPKEWGSMTNLLNINLLGNRLTGSIPKEIANISTLIQLELTANQMSGNITSELGNLPQIRTLRFSSNNFSGELPATLAKLTTLQDFQISDNQFSGKIPDFIQNWTNINTLIIQGSGLSGPIPSIISLLRNLTDLRISDLNGSEYAPLPQLNNMTSLSKLILRNCNINGTLPEYLRTMTSLKILDFSFNKFSGTIPSTYADINNVMNYIFLTGNLLTGPIPPWKTNIYVDLSYNNFSISQGNQICQNDKVNSFSTSWANKNIGTVSCLSECTKPSYSLYINCGGQQETVNRTSYNGDSDSPGPAKFHVSPTGNWAFSTTGIFIDSDQLGETYSPQNVTTLTMADADLYMNARGSAISLTYYGFCLANGSYTVNLHFAEIMFRDDQTYGSLGRRVFDIYLQGKPVQKDFNIAIEAGGVGKKVIKPFKDVVVTSNTLEIRLYWAGKGTQSLPNRSVFGPLISAISVESDSPPGSISAGAVVGIVVAATIVIILVFGILWWKGCFGKKNSLAK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5382 634 Gene3D Ribonuclease Inhibitor 32 160 IPR032675 -
Psa5g5382 634 Gene3D Ribonuclease Inhibitor 161 267 IPR032675 -
Psa5g5382 634 Gene3D Ribonuclease Inhibitor 268 392 IPR032675 -
Psa5g5382 634 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 380 551 - -
Psa5g5382 634 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 291 - -
Psa5g5382 634 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 351 - -
Psa5g5382 634 SUPERFAMILY L domain-like 83 360 - -
Psa5g5382 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 291 - -
Psa5g5382 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 380 551 - -
Psa5g5382 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 351 - -
Psa5g5382 634 Pfam Malectin domain 401 586 IPR021720 -
Psa5g5382 634 Gene3D - 398 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5382 Psa-Chr5 468482244 468491174 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5382 25 634 Receptor kinase-like Gene Family AT1G53420 47.819 2.72e-174 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5382 - - mtr:MTR_2g075140 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5382 5 468482244 468491174 Psa5g5382 5 468482244 468491174 ECH