Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4667 ATGGACCTTACTCTTAAGCTTTCTCCTTGCGGTGAAAATGTGGAAGAAAGGAAGTTGATAAGGTCTTCTTCATTGGTGGGTGGAGAGATAAGAAGTGTTAGTGTTTCGAATTGGTGTCCATTTGGGTCATCTATAGAGAGATCTTCATCTCTTCCAATTGATGGTGGGGAGAGAATGGTTCTAGAGAGGCAGAGAAAGGTGGCAGCTTCAGAGCTTCATGGTCCAAGAAATTCATCTGAAGGAGTAGTTGCTTCCAGTTTCCAGATATCAACCAAACACGAAAACAAATCAACGATTTTCCCGAAAGCGACAATCAAGGAAATTCCAGTTCCGCCTAAGTCTACCGATACTAAGATTAAGAATCAAACAAAAAAGCTTAATCTCCCTAACTACTGCAGTCTTAAGGGTGATGTGATGGAGAAACTGAGACAAATGCCGACCGTAACAACGACCGGAGACGGACCAAACGGTAAGAGAATAGAAGGCTTTCTTTACAAGTATAGATCCGGTGAAGTTTGTATCGTATGCGTCTGCCATGGTAGCTTCCTCACACCAAAAGAGTTTGTGATTCATGCTGGTGGAAAAGAAGTGGCTAATCCAATGAAGCATATCACTGTTTATCCTGTCTCATTTTAG 636 0.4214 MDLTLKLSPCGENVEERKLIRSSSLVGGEIRSVSVSNWCPFGSSIERSSSLPIDGGERMVLERQRKVAASELHGPRNSSEGVVASSFQISTKHENKSTIFPKATIKEIPVPPKSTDTKIKNQTKKLNLPNYCSLKGDVMEKLRQMPTVTTTGDGPNGKRIEGFLYKYRSGEVCIVCVCHGSFLTPKEFVIHAGGKEVANPMKHITVYPVSF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4667 211 Pfam Tify domain binding domain 174 205 IPR032308 -
Psa5g4667 211 PANTHER AFP HOMOLOG 2 86 209 IPR031307 GO:0007165
Psa5g4667 211 PANTHER AFP HOMOLOG 2 1 58 IPR031307 GO:0007165
Psa5g4667 211 PANTHER NINJA-FAMILY PROTEIN AFP1 1 58 - -
Psa5g4667 211 PANTHER NINJA-FAMILY PROTEIN AFP1 86 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4667 Psa-Chr5 414214956 414216915 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4667 - - gmx:100814728 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4667 5 414214956 414216915 Psa5g4667 5 414214956 414216915 ECH