Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4596 ATGGCATGTTCCTCAAAAACTCTCTTCCATGTTCCTAAGTTGAATGAGAGTATGCTTCTTGATTCTAAATCCAAAGAGGTTTTTAGCATTTGTCCTTCAAAACATGGTAAAGCAAAACCAAGCATCAACTCTAGTACTGTCTCAATTAATGCACATGCAACAATTTGTGTTAGCAAAAGTTTGAAGTGGTGGAAGAAGAATTTGAAGACTAATATGATAGAGATCCATTCAGCTCAAGAACTTGTTCATTCTTTGGCCAACGCCGGTGATGCATTGGTTGTGGTAAATTTCTATTCGCCAGGTTGTGGAGGTTGCAAAGCCCTTCATCCAAAACTATGTCAAATAGCAGAACTATATCCAAGTATAATATTTCTGAAAGTGAATTACGAGGAACTGAGAAGTATGTCTCAAAGTTTGCACATTCATGTTTTACCGTTCTTCAGAGTCTATAGAGGTGCAGAGGGTAGAGTTTGTAGCTTCAGTTGTACAAACACAACGATAAAGAAATTGAAGGATGCTATAGCAAAACATGGAAATGAAAGATGTAGCTTAGGTGAAGCAAAAGGTTTGGAAGAGGCTGAGTTGAAGGATTTGGCGTCAATTGGTGAAATAACAATTGATTCTCCTTCGTTGTATTCTATGGAAGAGAAATTGAAGGGTTTTTCTGATGTTTGGAATATGACAGCAAGTAATAACTAA 699 0.3705 MACSSKTLFHVPKLNESMLLDSKSKEVFSICPSKHGKAKPSINSSTVSINAHATICVSKSLKWWKKNLKTNMIEIHSAQELVHSLANAGDALVVVNFYSPGCGGCKALHPKLCQIAELYPSIIFLKVNYEELRSMSQSLHIHVLPFFRVYRGAEGRVCSFSCTNTTIKKLKDAIAKHGNERCSLGEAKGLEEAELKDLASIGEITIDSPSLYSMEEKLKGFSDVWNMTASNN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4596 232 ProSiteProfiles Thioredoxin domain profile. 33 203 IPR013766 -
Psa5g4596 232 PANTHER THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC 33 224 - -
Psa5g4596 232 PANTHER THIOREDOXIN, MITOCHONDRIAL 33 224 - -
Psa5g4596 232 Gene3D Glutaredoxin 61 179 - -
Psa5g4596 232 CDD TRX_family 92 175 - -
Psa5g4596 232 SUPERFAMILY Thioredoxin-like 62 178 IPR036249 -
Psa5g4596 232 Pfam Thioredoxin 84 163 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4596 Psa-Chr5 406812623 406814220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4596 - - gmx:100801871 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4596 5 406812623 406814220 Psa5g4596 5 406812623 406814220 ECH