Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4336 ATGACAAGGACAGATCGACAACTTGTTGAGGATCTATTTGCTGATGGACATGCACAAGTTTTGGTATCCACTGCTACCCTTGCCTGGGGTGTGAGTCTTCCTGCCCATACAGTGATAATTAAAGGGACACAGATTTACAATCCTGAAAGAGGGGTCTGGTTTGAATTGAGTCCTCTCAACGTTATGCAAATGTTGGGTCGTGCTGGAAGGCCCCAATACGATTCTTATGGCGAGGGAATAGTTGTTACTGGCCACGGTGAGTTACAATATTACCTCTTTCTCATAAACCAGCAGCTTCCTGTTGAGAGCCGGTTTGTTTCAAAGCTGACCGATCAGTTGAGTGCAGAAGTGGTTCTTGGTACGGTTCAAAACACACATGAAGTCACGTGA 390 0.4564 MTRTDRQLVEDLFADGHAQVLVSTATLAWGVSLPAHTVIIKGTQIYNPERGVWFELSPLNVMQMLGRAGRPQYDSYGEGIVVTGHGELQYYLFLINQQLPVESRFVSKLTDQLSAEVVLGTVQNTHEVT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4336 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 100 IPR027417 -
Psa5g4336 129 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 129 IPR001650 -
Psa5g4336 129 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH12-LIKE 1 127 - -
Psa5g4336 129 CDD SF2_C_Ski2 1 83 - -
Psa5g4336 129 Pfam Helicase conserved C-terminal domain 1 70 IPR001650 -
Psa5g4336 129 SMART helicmild6 1 72 IPR001650 -
Psa5g4336 129 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 1 127 - -
Psa5g4336 129 Gene3D - 1 92 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4336 Psa-Chr5 363052345 363052734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4336 K12854 - gmx:100816176 229.18