Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4252 ATGGCCACGAAAGGGAACCCGGGAGATAATAGAAATAACAAAGGTCCAATGTCTATTTTCATTGTATTTGCTTTATGTGGTTTCTTCTATATATTAGGTTTGTGGCAAAGGAGTGGTTTTGGAAAAGGAGATAGCATTGCTGTTGAGATTACTAAACATACAGATTGTACTGTTCTTTCTGATCTAAACTACGAAACTCACCATGATGGTGACGCTGGAACGGATGATAATCCAAACGAACAAGTCAAGGAGTTCAAGCCTTGCGATGATCGCTTCATTGATTACACGCCTTGCCATGATCAAGCAAGGGCGATGACGTTTCCGCGAGAGAATATGAATTATAGAGAAAGACATTGTGCTCCTGAAGAAGAGAAATTGCATTGTCTCATAGCTGCTCCTAGAGGGTATGCAACGCCGTTTCCTTGGCCTAAGAGCCGCGATTATGTGCCGTATGCAAACGCGCCTTACAAGAGCCTCACAGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGGAATGTTTTCAGGTTTCCTGGTGGGGGAACTCAATTTCCTCAGGGTGCTGATGCTTACATTAATCAACTTGCAGCTGTTATTCCATTGGATAATGGGATGGTTAGAACTGCGTTAGATACTGGGTGCGGGGTTGCGAGTTGGGGTGCTTACTTGTTTAAGAAAAATGTTATTGCAATGTCAATTGCACCAAGGGACTCTCATGAAGCGCAGGTTCAATTTGCTTTGGAAAGAGGTGTTCCTGCAATCATTGGTGTTCTTGGAACAATAATGCTTCCTTTTCCTTCCGGATCTTTTGACATGGCACATTGTTCTCGCTGCTTGATTCAATGGGGTGCAAATGGTGGATTGTATATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGTCCTCCGATCAACTGGAAGAACAACTTCCAAGCATGGCAACGCCCTGAGGATGAGCTTAAGGAGGAACAAAGGCAGATTGAGGACACTGCTAAACTTCTTTGCTGGGAAAAGAAACACGAGAAAGGTGAAATTGCAATCTGGAGAAAAGCATTAAGCAATGATGAATGCAGTGAGCAAGAAACTCAGCGTACAATATGTGAATCTGCGAATTCTGATGATGTCTGGTACAAGAAGATGGAAAACTGTGTAACTCCTGCCAAACCTAGTGGTTCGTGGAAGCCATTCCCTGAGAGACTCAATGCTGTTCCTTCGAGAATCACCAGTGGATCCATTCCCGGTGTATCCGCAGAGTTATTTGAGGAGGACAACCGATTATGGAAGAAACATGTGAATGCTTACAGGCGTGTCAACAAAATCATCGACTCGGGGAGGTATCGCAATGTGATGGACATGAATGCTGGTTTTGGAGGTTTTGCTGCGGCCATAGACTCTCCCAAATTATGGGTTATGAATGTCGCGCCTACGATTTCTGAGAAAGCTAGCCTTGGTGTTGTCTTCGAGCGAGGATTGATTGGCATTTATCATGATTGGTGTGAAGCCTTCTCCACATATCCAAGGACCTATGACCTTATCCATGCAAATGGTGTTTTCACCTTGTACAAAAATGCGTGTAATGCAGAAGATATTCTATTGGAGATGGACCGCATCTTACGGCCCGAGGGAGCGGTAATATTCCGAGATCAGGTTGGAGTGCTGAAGCAAGTTAAAAGAATTGCAAAAGGAATGAGATGGAATACCAAAATGGTGGATCATGAAGATGGTCCACTGATTTCAGAGAAGGTGTTGTATGCCGTCAAAAGATATTGGGTTGCCGGTGACAACACCACAAGCTCAGGGTAG 1824 0.4419 MATKGNPGDNRNNKGPMSIFIVFALCGFFYILGLWQRSGFGKGDSIAVEITKHTDCTVLSDLNYETHHDGDAGTDDNPNEQVKEFKPCDDRFIDYTPCHDQARAMTFPRENMNYRERHCAPEEEKLHCLIAAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYINQLAAVIPLDNGMVRTALDTGCGVASWGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIQWGANGGLYMKEVDRVLRPGGYWILSGPPINWKNNFQAWQRPEDELKEEQRQIEDTAKLLCWEKKHEKGEIAIWRKALSNDECSEQETQRTICESANSDDVWYKKMENCVTPAKPSGSWKPFPERLNAVPSRITSGSIPGVSAELFEEDNRLWKKHVNAYRRVNKIIDSGRYRNVMDMNAGFGGFAAAIDSPKLWVMNVAPTISEKASLGVVFERGLIGIYHDWCEAFSTYPRTYDLIHANGVFTLYKNACNAEDILLEMDRILRPEGAVIFRDQVGVLKQVKRIAKGMRWNTKMVDHEDGPLISEKVLYAVKRYWVAGDNTTSSG* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4252 607 PANTHER METHYLTRANSFERASE PMT18-RELATED 2 603 - -
Psa5g4252 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 603 IPR004159 GO:0008168
Psa5g4252 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 565 IPR029063 -
Psa5g4252 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 334 IPR029063 -
Psa5g4252 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 594 IPR004159 GO:0008168
Psa5g4252 607 Gene3D Vaccinia Virus protein VP39 162 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4252 Psa-Chr5 346115081 346119314 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4252 - - gmx:100807547 1127.85