Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g4197 | GGTGGTAAAAAACTATATGTACCGCGGGTGGAGGATAAAAACAGTCACATGCGTATGCTTAACATATCGCGTCTTGATGACCTTGTCGCAAACTCAATGGACATCTTAGAACCAGCTCCAGTTGATGCTGATGGAAATGCACGTGAAGACGTTTTGCAGGCAAATGACCCAGTTGATATTTTGCTCTTACCTGGATTGGCATTTGACAGATCTGGAAGACGTTTAGGCCGTGGTGGAGGTTATTATGATACCTTCCTGAAAAATTACAAGGACCTTGCAGAGGCACGCAATTGGAAGCAGCCCTTGCTTGTTGCACTTTCATATTCACAACAAATACTAGATGATGGAGTAATACCAGTTACTTCAACTGATATTCCAGTTGATGCTCTTGTATCTCCAGAGGGTGTAATTCCCATCAGTTCCGCTGCCTTCAACAGAATGGATCTCTGA | 450 | 0.4356 | GGKKLYVPRVEDKNSHMRMLNISRLDDLVANSMDILEPAPVDADGNAREDVLQANDPVDILLLPGLAFDRSGRRLGRGGGYYDTFLKNYKDLAEARNWKQPLLVALSYSQQILDDGVIPVTSTDIPVDALVSPEGVIPISSAAFNRMDL* | 150 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g4197 | 149 | PIRSF | 5_FTHF | 1 | 136 | IPR002698 | - | |
| Psa5g4197 | 149 | Gene3D | - | 1 | 136 | IPR024185 | - | |
| Psa5g4197 | 149 | PANTHER | 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE, MITOCHONDRIAL-LIKE ISOFORM X1 | 3 | 148 | - | - | |
| Psa5g4197 | 149 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 2 | 139 | IPR037171 | - | |
| Psa5g4197 | 149 | Pfam | 5-formyltetrahydrofolate cyclo-ligase family | 2 | 133 | IPR002698 | - | |
| Psa5g4197 | 149 | PANTHER | ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE | 3 | 148 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g4197 | K01934 | - | gmx:100527426 | 261.151 |