Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4166 ATGCTCTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGAGGCACCTGTCTGGGATTGTGTTATTGGTATCCCGTCATACTTCACCGACTTGCAGAGACGAGCTTATCTTGATGCGGCGAAAATTGCTGGGTTGAAGCCTTTAAGATTGATCCATGATTGTACTGCAACTGCCCTTAGCTATGGAATTTACAAAACGAATTTTCAAAGTGAAGGTTCAACATATGTTGCATTTATTGACATTGGTCAATGCGATACTCAGGTCTGCATTGCAGCATTTCAGTTTGGGCAAATGAAGATACTTTCTCATACTTTTGACAGGAGTTTAGGTGGGAGGGACTTTGACGAGGTTCTATTTACTCATTTTGCGGAAAAATTCAAGGAACAATACAACATTGATGTGTATTCTAATGCCAAGGCATGCATTAGGCTGCGTTCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCCAGAGGCACCGCTAAATATCGAGTGTTTGATGGATGAGAAAGATGTTAAGGGCTTTATCACACGGGAAGAATTTGAGAGTCTTGCATCGGGATTATTGGAGAGAATTTCTAAACCTTGCAGCCAAGCATTACTTGAAGCAGGCTTGAATGCAGAGAAGATTGTTTCTGTAGAACTAGTTGGTTCAGGTTCTAGGATTCCAGCAGTAAGTACATTATTAACTTCTCTATTCAAAAGAGAACCCAGCCGAAAGCTGAATGCAAGCGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCTATGCTCAGTCCTGTATACCGTGTGAGAGACTATGAGGTCCAGGATATTAGTTCTTTTTCATATGGGCTTTCATCAGATGAAGGTCCAATTTCTGTAGGATCAAATGGTGTAATCTTCCCAAAAGGCCAATTGATTCCAAGTACTGCAGTTCTACAACTACAGCGAACTAGTTTTTTCCATTTGGAAGCTTTTTATCCGAATCAATATGAACTACCACCTGGAACAAGTCCCAAAATTAGTTCCTTCATGATTGGTCCTTTGCCTGAATCTCATGGCAATAAGACAAGAGTTAAAGTTCGAGTTCAACTAAATCTGCACGGCATTTTCAGTATTGAATCAGCTACATTGATCACAGATCACGCAAATGATGATCACTCAAATTATGATGCAATGGATGTTGATCCCGAGTCTGAAACATCAGATAGTACCAATTTTGTTGCCAATGGCGCTGAAGATAGTAACAATCAGTCCGATTCTCCACAAAGTTCTGCTGATTGTTCAAAAAAAGATAAAGCTAACAGAAAGCTTCCTATTCCGGTGAATGAGAGTATCTATGGTGGAATGACAATGGCAGAGATTTGTGAAGCCCATGAAAAAGAACTCCAGTTAGCCCAACAGGATAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACTTTGGAATCCTATGTCTACGAGACAAGGAGTAAGCTTTTCAACACGTATCGGAGCTTTGCAAGTGATCAAGAGAGGGATGACATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTACGAGGACGGTGATGATGAAACCGAACACGCTTATACTTCAAAACTGGAAGACCTTAAAAAGCTGGTGGATCCAATTGAGAATCGCTACAAAGACGATGAAGAAAGAGCGCAAGCTATAAAAGAGTTATCAAGTCTCGTTTCAGAGATTCACCAGTTTGCAGGCTCCTTTCCACCCCAAGATAAAGAACTGATCATCGACGAGAGTAATAAAGCAGAGCAGTGGCTAAAAGAGAAAGTGCAACAACAAGATTCTTATCCTAAGAATCGTGACCCAATATTATGGTCGAGTGATATTAAGAGCGTAGCAGAGGATCTAAAACTGACAGTGCAAAGGATAGCGAGATCCAGGAGAACTTCAGAAGACAATGACAAAGACAAGATGGATACTTCCAATCATTCATGA 1956 0.408 MLFAHLKTMTEKDLEAPVWDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGIYKTNFQSEGSTYVAFIDIGQCDTQVCIAAFQFGQMKILSHTFDRSLGGRDFDEVLFTHFAEKFKEQYNIDVYSNAKACIRLRSACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFESLASGLLERISKPCSQALLEAGLNAEKIVSVELVGSGSRIPAVSTLLTSLFKREPSRKLNASECVARGCALQCAMLSPVYRVRDYEVQDISSFSYGLSSDEGPISVGSNGVIFPKGQLIPSTAVLQLQRTSFFHLEAFYPNQYELPPGTSPKISSFMIGPLPESHGNKTRVKVRVQLNLHGIFSIESATLITDHANDDHSNYDAMDVDPESETSDSTNFVANGAEDSNNQSDSPQSSADCSKKDKANRKLPIPVNESIYGGMTMAEICEAHEKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRSFASDQERDDISRSLQETEDWLYEDGDDETEHAYTSKLEDLKKLVDPIENRYKDDEERAQAIKELSSLVSEIHQFAGSFPPQDKELIIDESNKAEQWLKEKVQQQDSYPKNRDPILWSSDIKSVAEDLKLTVQRIARSRRTSEDNDKDKMDTSNHS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4166 651 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 650 - -
Psa5g4166 651 Gene3D Actin; Chain A, domain 4 111 194 - -
Psa5g4166 651 MobiDBLite consensus disorder prediction 409 434 - -
Psa5g4166 651 Pfam Hsp70 protein 1 547 IPR013126 GO:0005524|GO:0140662
Psa5g4166 651 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Psa5g4166 651 MobiDBLite consensus disorder prediction 631 651 - -
Psa5g4166 651 Coils Coil 533 553 - -
Psa5g4166 651 Gene3D - 447 558 IPR029048 -
Psa5g4166 651 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 265 480 IPR029047 -
Psa5g4166 651 Gene3D - 67 241 - -
Psa5g4166 651 SUPERFAMILY Actin-like ATPase domain 72 262 IPR043129 -
Psa5g4166 651 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 451 547 IPR029048 -
Psa5g4166 651 Gene3D - 1 255 - -
Psa5g4166 651 PANTHER HSC70CB, ISOFORM G-RELATED 1 650 - -
Psa5g4166 651 PRINTS 70kDa heat shock protein signature 21 41 - -
Psa5g4166 651 PRINTS 70kDa heat shock protein signature 213 229 - -
Psa5g4166 651 PRINTS 70kDa heat shock protein signature 244 264 - -
Psa5g4166 651 PRINTS 70kDa heat shock protein signature 269 288 - -
Psa5g4166 651 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 268 443 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4166 Psa-Chr5 330227144 330233770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4166 1 543 Miscellaneous Gene Families AT5G28540 26.944 9.21e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4166 K09489 - gmx:100783952 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4166 5 330227144 330233770 Psa5g4166 5 330227144 330233770 ECH