Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4128 ATGGTTAAGGGTTTGCACAGCCAAAACCTCCCCGCCGATGTAGCACATGTCGTCGATCAGCTAGAGCGCCACTGCTTGGCTCCTGATGGATCTCTCATCTCCAAGCCTCTCTACAACGATCTCCAACTCGCTAGAGAGGAAATGTGCAGGGAAAGACATCGCTATCTCGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCATCAAGCCATTTCTGTGTCTAGCATCGGTGGAATGAGAGATACTGGAGGTCTTTATCCGCAGTTTGGATTGAGGAACTCTCCTCAGGTTTATCAGACATTAGAACATCAAATGATTGTCGCTGAAGCGGCTCAGCGATTGAGACTTCCTCTTATTTCCAAAGATGGAGAAGTTCACGATGAAGAAATTGAAAAGCTAAGTGTAGTGTCTCGAAGTTCCCTTGACAGTACTAGCAGCAATGCTGTTAACAATTCAAGCATGAATTCTTCTAGTTATGCCACTCCAAACAGCTCTGTTAGTGGGGTTAATTATTCCCTTGCTTCTATGGATCAAGTAGAACCTGTAGTTGGTGGTGTTCCCAATCGTTTTCTTGGAATTACACCGGCTTATTTGTGGCAGACTCAGCATCTGAAAACACCATTATCTGTGGATATGACAGAATATCGCATGTCTCTCTCACGGGAGGTAGATGCTCGCTTGAAAATGAAATGTGATAAGTTATCAGACGCGTTTGTACTGGATGACAATGATTCATCATCATCTGGAAGTCAAAGTTCAACTTCACGGCTTCCAGAAAGAGTGAAGTTGTTGATTGAGGAGATCGAAAGAGAAGAAGCAGCACTGAGGGATGACCTTTATTCTGCTGATAGAAAATTCGCTGAATATTATAGTGTATTGGAACAGATACTTGGGGTGCTCAATAAACTTGTCAAAGATTTGAAGTTGGATCATCAACATAAATATGATGAGATGCAGAAAACCTGGCTGTGTAAAAGATGTCAGACCATGAGTGCAAAATTGAGGGTTCTCGAAAATGTTCTTCTCCTCGGAACTTACACTAAGGAGTCTATTCCCGCCCTTCATAAGATAAGGAAGTATCTCGTCGAGGCTACTGAAGAGGCTTCTATTGCATATAACAAAGCGGTTACTCGACTGCGCGAGTACCAGGGTGTGGATCCTCACTTTGACGACATTGCAAGGCAGTACCACGACATTGTAAAGAAATTGGAAAACATGCAATGGACAATAGACCAAGTTGAGATGGATCTGAAACGCATGAAGGATTTGGAAGCTCGAATTGTGCATGTGTATTGCGAAGCTAATCATGATGCTGATGCACTCGCAAAACTTGGAGTTAATCATAGGGGAGGTAGAGCGAGATGCTTCAAAGGCGATGATGATGAGGAACTTTTTGAGGTGTCTATTCATGTTAATGCAAAGACACATGTTGAGGTGCTTACTCATGTTGATATAGAGACACATGCTGATGTGCCTAATAATGTTGATATAGAGGGACATGCTGAGGTGTTTGATCATACAGTGCTTCCCAAACATGATACAATTGAGGGGTTCCCAAGAGTGCCCATTGGACTTGATAATGCTGACAGAGTCCTGTTTTCATGTTGCCTTTCAATTATGGTAGGTATAAATATTTTAGTTTAA 1659 0.425 MVKGLHSQNLPADVAHVVDQLERHCLAPDGSLISKPLYNDLQLAREEMCRERHRYLEAMAIYSEAIAMVEEYHQAISVSSIGGMRDTGGLYPQFGLRNSPQVYQTLEHQMIVAEAAQRLRLPLISKDGEVHDEEIEKLSVVSRSSLDSTSSNAVNNSSMNSSSYATPNSSVSGVNYSLASMDQVEPVVGGVPNRFLGITPAYLWQTQHLKTPLSVDMTEYRMSLSREVDARLKMKCDKLSDAFVLDDNDSSSSGSQSSTSRLPERVKLLIEEIEREEAALRDDLYSADRKFAEYYSVLEQILGVLNKLVKDLKLDHQHKYDEMQKTWLCKRCQTMSAKLRVLENVLLLGTYTKESIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDDIARQYHDIVKKLENMQWTIDQVEMDLKRMKDLEARIVHVYCEANHDADALAKLGVNHRGGRARCFKGDDDEELFEVSIHVNAKTHVEVLTHVDIETHADVPNNVDIEGHAEVFDHTVLPKHDTIEGFPRVPIGLDNADRVLFSCCLSIMVGINILV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4128 552 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 2 423 IPR029327 GO:0051225|GO:0070652
Psa5g4128 552 Coils Coil 270 290 - -
Psa5g4128 552 Coils Coil 408 428 - -
Psa5g4128 552 Pfam HAUS augmin-like complex subunit 4 183 420 IPR029327 GO:0051225|GO:0070652
Psa5g4128 552 PANTHER BNAA06G02620D PROTEIN 2 423 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4128 K16587 - gmx:100786070 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4128 5 326689121 326698793 Psa5g4128 5 326689121 326698793 ECH