Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4094 ATGGAGGCGCCCCCATTCGCTCCTTCATATTCCCCTTCTTCTCTCCTCCTTCGTCGCAAAACACCACTTTCCTTCACTAAATTCTCTCGCTCTCCCAATGTCAAAATCCGAACCAACTTCTCAATTCGTGCTTCCTCTTCTAGTGATTCTGTTGTGACTTTACTTGATTATGGTGCTGGCAATGTTCGAAGTATTAGAAATGCTATCAAATTTCTCGGGTTTGAAATCAAAGATGTTAAAACCCCAGAAGACATTTTGAATGCAAGTCGTTTAATCTTTCCGGGTGTTGGAGCATTTGCACCTGCTATGGAGGTGTTAAGCAAATCTGGGATGGGCGAAGCACTATGTTCATATATTGAAAAGGATCGTCCATTTTTAGGCATATGTCTTGGTCTTCAATTACTTTTTGAATCTAGCGAGGAGAATGGACCAATAAAAGGTCTTGGCTTAATACCTGGAACTGTTGGGAGATTTGATTCATCAAAGGGTTTTAGAGTACCGCATATCGGATGGAATGCTTTGAAAATCACAAAGGACTCGGAAATTTTGGATGATGTTGGAAACCACCATGTCTATTTTGTTCACTCTTATCGTGCCATGCCTTCAGATGATAATAGAGAGTGGATATCCTCCACCTGTGACTATGGTGATAAGTTTATAGCATCTATTAGAAGAGGAAATGTGCATGCAGTTCAGTTCCATCCAGAGAAGAGTGGAGATGTTGGTCTTTCTATTTTGAGAAGATTCTTGTATCCGAAATCAAATGTGGCAAAGAAGACTGGTGAAGGCAAAGCTTCAAAACTCGCTAAAAGGGTGATTGCTTGTCTTGATGTGAGAGCAAATGATAACGGGGACCTTGTTGTAACCAAAGGAGACCAGTATGATGTAAGAGAAAATACAGAAGAAAATGAGGTTAGGAATCTTGGTAAGCCAGTTGAGCTTGCTGAACAGTACTATAAAGATGGAGCTGATGAGGTCAGCTTTCTAAACATCACTGGATTTCGCGACTTCCCTCTTGGTGATTTACCAATGTTGCAGGTATTGCGATACACATCAGAAAATGTTTTTGTACCCTTAACAGTTGGGGGTGGAATTAGAGATTTTACAGATTCACAAGGAAGGCACTATTCTAGTTTGGAAGTAGCTGCGGAATATTTTAGGTCCGGGGCTGACAAGATATCCATTGGAAGTGATGCAGTTTATGCTGCTGAAGAATATATAAGAACTGGAGTAAAGACAGGGAAGACCAGCTTAGAGCAGATATCAAGAGTTTATGGGAATCAGGCAGTTGTTGTTAGTATTGATCCCCGTAGGGTTTACATAAACGATTCAAATGACGTGCAATTCCAGACCATAAGGATTTCAAGTCCAGGTCCAAATGGAGAAGAATATGCCTGGTATCAGTGTACAGTTAATGGGGGACGGGAAGGCCGGCCAATTGGGGCTTATGAACTAGCAAAGGCTGTTGAAGAGCTTGGTGCTGGTGAAATACTGTTAAACTGCATCGACTGTGATGGTCAAGGGAAAGGTTTTGATGTCGATTTAGTTAAGTTGATCTCAGATGCTGTAAGTATCCCTGTGATTGCTAGTAGTGGCGCTGGCGTTCCTGATCACTTTTCCGAGGTGTTTGCTAAAACCAATGCTTCCGCAGCACTCGCTGCTGGCATTTTTCATAGAAAGGAGGTACCTATTCAATCAGTGAAAGAACATTTGTTGAAGGAAGGCATAGAAGTCCGAATCTGA 1743 0.4182 MEAPPFAPSYSPSSLLLRRKTPLSFTKFSRSPNVKIRTNFSIRASSSSDSVVTLLDYGAGNVRSIRNAIKFLGFEIKDVKTPEDILNASRLIFPGVGAFAPAMEVLSKSGMGEALCSYIEKDRPFLGICLGLQLLFESSEENGPIKGLGLIPGTVGRFDSSKGFRVPHIGWNALKITKDSEILDDVGNHHVYFVHSYRAMPSDDNREWISSTCDYGDKFIASIRRGNVHAVQFHPEKSGDVGLSILRRFLYPKSNVAKKTGEGKASKLAKRVIACLDVRANDNGDLVVTKGDQYDVRENTEENEVRNLGKPVELAEQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFTDSQGRHYSSLEVAAEYFRSGADKISIGSDAVYAAEEYIRTGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYINDSNDVQFQTIRISSPGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDVDLVKLISDAVSIPVIASSGAGVPDHFSEVFAKTNASAALAAGIFHRKEVPIQSVKEHLLKEGIEVRI* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4094 580 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 63 580 - -
Psa5g4094 580 SUPERFAMILY Ribulose-phoshate binding barrel 267 579 IPR011060 -
Psa5g4094 580 ProSiteProfiles CobBQ-type GATase domain profile. 43 242 - -
Psa5g4094 580 Gene3D Aldolase class I 273 580 IPR013785 -
Psa5g4094 580 Pfam Histidine biosynthesis protein 271 562 IPR006062 GO:0000105
Psa5g4094 580 Gene3D - 47 272 IPR029062 -
Psa5g4094 580 SUPERFAMILY Class I glutamine amidotransferase-like 51 251 IPR029062 -
Psa5g4094 580 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 63 580 - -
Psa5g4094 580 CDD HisF 270 574 IPR004651 GO:0000105|GO:0000107
Psa5g4094 580 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 51 252 IPR010139 GO:0000105|GO:0016763
Psa5g4094 580 TIGRFAM hisF: imidazoleglycerol phosphate synthase, cyclase subunit 268 579 IPR004651 GO:0000105|GO:0000107
Psa5g4094 580 CDD GATase1_IGP_Synthase 52 250 IPR010139 GO:0000105|GO:0016763
Psa5g4094 580 Pfam Glutamine amidotransferase class-I 54 249 IPR017926 -
Psa5g4094 580 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 52 250 IPR010139 GO:0000105|GO:0016763
Psa5g4094 580 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 51 259 - -
Psa5g4094 580 PIRSF IGPS_HisHF 49 580 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4094 K01663 - gmx:100500353 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4094 5 324703255 324709157 Psa5g4094 5 324703255 324709157 ECH