Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4015 ATGACTTCTCCCGTGGTTGCGGAAGCTGCCACCGTCGCAGCTTTGCGGTCGGTTATGCTCCGGGTCCAACAAGCAGCAGAAAGATCCGGAACCAAACCCGATCGAGTCCGAGTCGTCGCAGTATCCAAAACCAAACCCATTTCCATGATTCGCCAACTCTACGACGCAGGTCACCGTTGCTTCGGCGAAAACTACGTCCAAGAAATCATTGAAAAAGCTCCTCAGCTTCCACAAGACATTCAGTGGCACTTCATTGGCCATTTGCAAAGCAATAAAGTCAAAGCACTCTTGAGCGGAGTTCCAAATTTGGCCATGGTTGAGGGTGTGGACAATCAGAAGGTGGCAAATAATCTCGACCGTATGGTTTCAACCCTGGGAAGAAATCCTCTGAGAGTTTTGGTGCAAGTAAATACCAGTGGAGAAGAGTCCAAGTCAGGTGTTGATCCTTCTAATTGTGTTGATCTTGCAAAACATGTGAAATTGAGCTGCCCAAACTTAGAATTCTCTGGCTTAATGACAATAGGAATGCTAGATTATACCTCAACTCCGCAGAACTTTCAGACCCTATCAAATTGCAGGACTGAAGTTTGCAAGGCACTTGAAATGGATGAGGAGCAATGTGAACTGTCAATGGGCATGTCCGGTGATTTTGAGTTAGCGATCGAATCGGGCAGTACTAATGTGAGAGTTGGATCAACAATATTTGGACCAAGAGAGTATGCAAAAAAACAATAA 735 0.4571 MTSPVVAEAATVAALRSVMLRVQQAAERSGTKPDRVRVVAVSKTKPISMIRQLYDAGHRCFGENYVQEIIEKAPQLPQDIQWHFIGHLQSNKVKALLSGVPNLAMVEGVDNQKVANNLDRMVSTLGRNPLRVLVQVNTSGEESKSGVDPSNCVDLAKHVKLSCPNLEFSGLMTIGMLDYTSTPQNFQTLSNCRTEVCKALEMDEEQCELSMGMSGDFELAIESGSTNVRVGSTIFGPREYAKKQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4015 244 SUPERFAMILY PLP-binding barrel 11 236 IPR029066 -
Psa5g4015 244 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 20 238 IPR011078 GO:0030170
Psa5g4015 244 ProSitePatterns Uncharacterized protein family UPF0001 signature. 82 96 IPR011078 GO:0030170
Psa5g4015 244 CDD PLPDE_III_YBL036c_euk 15 236 - -
Psa5g4015 244 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 9 243 IPR011078 GO:0030170
Psa5g4015 244 PIRSF YBL036c_PLPDEIII 2 244 IPR011078 GO:0030170
Psa5g4015 244 Hamap Pyridoxal phosphate homeostasis protein. 13 237 IPR011078 GO:0030170
Psa5g4015 244 Pfam Alanine racemase, N-terminal domain 23 238 IPR001608 -
Psa5g4015 244 Gene3D Alanine racemase 5 244 IPR029066 -
Psa5g4015 244 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 9 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4015 Psa-Chr5 317094361 317097476 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4015 K06997 - gmx:121174069 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4015 5 317094361 317097476 Psa5g4015 5 317094361 317097476 ECH