Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4014 ATGACAACAACTCTTTCAATTCCACTCAATATCTTCTTCTTCCACCAAATTCAATCCACACCCACTTCTTCATTTCTTCATTCCCAAACAGTTACCTTTTCCCGCAGAAAAGCCACTCTAAAAATCGCTTGTTCCGGTTCACAACAAAACCCCCAACAACAACAAAACCAGCAGAAGAAGAAACAGTTTAATACCAATGATACTGATTCTGATGGTGAAAAGGGTTATGACCCTGTCGGGTTTCTCGTCAAACGTGGCATTTCTCACAAAGTATTTGCTCAGTTTCTTCGTGAAAGATATAAAGCGTTGAAAGACCTGAAAGATGAAATTTTGAAACGCCACATGAACTTCAAAGAGATGGCTTCTGGGTATGAGTTATTGGGCATGCATCGTCATCCAGAACATCGTGTGGATTATATGGAATGGGCTCCAGGAGCTCGTTATTGTGCAATTGCTGCCGACTTCAATGGTTGGTCAGCTACAGAAAACTGTGCAAGAGAGCATTACTTTGGTCACGATGATTATGGATACTGGTTTATTGTTCTCGATGATAAGCTTAGAGAGGGAGAAGAGCCAGATGAACTATATTTTCAGCAGTATAACTATGTAGACGATTACGATAAAGGGGATAGTGGAGTCACCATTGAAGAGCTTTTTAAAAAAACAAATGACGGGTACTGGCAACCAGGAGAAGACCGTTATATAAAAAACCATTTAGAAGTTCCGGCTAAGTTGTATGAGCAGTTTTTTGGTCCCAATGGACCTCAAACAATGGAGGAGTTAGGAAACATACCGGATGCAGAAACAAGGTATAAGGAATGGGCAGCAAAGAATGGACCTTCCCCTTATGCTGTAATTGATGATGGCAAGAACTACGACATATTTAATGTGAAAGTTGATCCCGAATGGCAAGAGAGAATTCGTGCACTGAAACCTCCTATTGAGTATTGGCTTGAGACACGTAAAGGTAGGAAGGCGTGGTTGAAAAAGTATATTCCTGGTATTCCTCACGGAAGCAAGTACAGGGTTTATTTTAACACTTCGAATGGACCGTTGGAGCGAGTACCTGCTTGGGCCACATATGTGCAGCCAGAATTAGATGGAAGGCAAGCTTATGCAATTCATTGGGAACCACCTCCTGAAGATGCTTACAAATGGAAAAATAAGAGCCCGAAAGTACCAAAGTCATTGCGAATTTATGAAGCTCATATTGGAATCAGTGGATCTGAGCCAAAAATATCCTCGTTCAATGATTTCGCAGACAAGACTCTTCCTCACATAAAAGAAGCTGGATACAATGCAATCCAGTTGATTGGAGTTGTCGAACACAAGGATTATTTTACTGTTGGTTACCGAGTTACCAATTTTTATGCTACTAGTAGTCGATACGGCACTCCTGATGACTTCAAGCGATTAGTCGATGAGGCACACGGACTAGGACTGCTTGTCTTCATGGAAATCGTCCATTCATACGCTGCTGCTGATGAGATGGTTGGATTATCATTGTTCGATGGATCTAACGACTGTTATTTTCATTCTGGTAAACGGGGGCAACACAAGTTCTGGGGAACCAGAATGTTCAAATATGGCGACGTTGATGTTCTTCATTTCCTTCTATCAAACTTGACGTGGTGGATAGAGGAGTATCAAATTGATGGCTTCCAGTTTCATTCACTCTCATCGATGATATATACTCACAATGGTTTTGCTTCTTTTACCGGTGACTTGGAGGAGTATAGTAACCAATATGTTGACAAGGATGCACTATTATATCTTATCATGGCCAACGAGATACTACATGTTCTTCACCCAAATATTGTCACAATAGCGGAAGACGCAACATATTATCCTGGATTATGTGAGCCAACTTCTCAAGGTGGACTTGGATTTGATTACTATGTCAACCTTTCTGCGCCCGAGATGTGGTCAACTTTTCTTGAGACCGTTCCTGACCATGAATGGAGCATGACTAAGATTGTTAACACATTAATCTCCAAAAAGGAATATGCTGATAAGATGCTCTTGTATGCAGAAAATCACAACCAGTCCATATCTGGAAGGCGGTCACTTGCAGAAGTATTGTTCGGTGAAATTGACGAGCATTCGGAAAATTATAAGGAGTCTTTATTGAGAGGTTCTTCATTACATAAAATGATCAGATTGATCACGTTAACAATTGGCGGCCGTGCGTATATGAACTTCATAGGCAATGAATTTGGGCATCCAAAGAGAGTTGAGTTTCCAACGTCAAGCAACGACTACTCATATTCGCTTGCCAATCGTCAGTGGGATCTTTTGGAAAAAGATGGAGTTCACCGTGATTTATTTACCTTTGATAAGGACATGATGAAGCTTGATAAAAATGAGAGAGTGCTCTCGCGGGGTTTTCCATCCTTTCACCATGTTAATGACAGTTCAAAGGTCATATCTTACGTTAGAGGTCCCCTTCTCTTCATTTTCAATTTTCATCCAACAAATTCTTATGATAGTTATACCGTAGGTGTAGAAGAAGCTGGGGAGTATGAACTAATTCTGAACACTGATGAAATAAAGTATGCCGGTCAAGGGATCCTTAAAGAGAACCAATATTTTCAAAGAACTATAAGCAGAAGAGTCGATGGGCATAGAAACTGCATAGAAGTGCAACTCCCTATCAGAACTGCTCAGGTTTACAAGTTAAAGCGCATTTTGAGAATATGA 2700 0.4067 MTTTLSIPLNIFFFHQIQSTPTSSFLHSQTVTFSRRKATLKIACSGSQQNPQQQQNQQKKKQFNTNDTDSDGEKGYDPVGFLVKRGISHKVFAQFLRERYKALKDLKDEILKRHMNFKEMASGYELLGMHRHPEHRVDYMEWAPGARYCAIAADFNGWSATENCAREHYFGHDDYGYWFIVLDDKLREGEEPDELYFQQYNYVDDYDKGDSGVTIEELFKKTNDGYWQPGEDRYIKNHLEVPAKLYEQFFGPNGPQTMEELGNIPDAETRYKEWAAKNGPSPYAVIDDGKNYDIFNVKVDPEWQERIRALKPPIEYWLETRKGRKAWLKKYIPGIPHGSKYRVYFNTSNGPLERVPAWATYVQPELDGRQAYAIHWEPPPEDAYKWKNKSPKVPKSLRIYEAHIGISGSEPKISSFNDFADKTLPHIKEAGYNAIQLIGVVEHKDYFTVGYRVTNFYATSSRYGTPDDFKRLVDEAHGLGLLVFMEIVHSYAAADEMVGLSLFDGSNDCYFHSGKRGQHKFWGTRMFKYGDVDVLHFLLSNLTWWIEEYQIDGFQFHSLSSMIYTHNGFASFTGDLEEYSNQYVDKDALLYLIMANEILHVLHPNIVTIAEDATYYPGLCEPTSQGGLGFDYYVNLSAPEMWSTFLETVPDHEWSMTKIVNTLISKKEYADKMLLYAENHNQSISGRRSLAEVLFGEIDEHSENYKESLLRGSSLHKMIRLITLTIGGRAYMNFIGNEFGHPKRVEFPTSSNDYSYSLANRQWDLLEKDGVHRDLFTFDKDMMKLDKNERVLSRGFPSFHHVNDSSKVISYVRGPLLFIFNFHPTNSYDSYTVGVEEAGEYELILNTDEIKYAGQGILKENQYFQRTISRRVDGHRNCIEVQLPIRTAQVYKLKRILRI* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4014 899 Coils Coil 93 113 - -
Psa5g4014 899 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 3, CHLOROPLASTIC/AMYLOPLASTIC 25 890 - -
Psa5g4014 899 SUPERFAMILY E set domains 120 203 IPR014756 -
Psa5g4014 899 MobiDBLite consensus disorder prediction 44 70 - -
Psa5g4014 899 SUPERFAMILY (Trans)glycosidases 340 795 IPR017853 -
Psa5g4014 899 Gene3D Glycosidases 384 787 - -
Psa5g4014 899 Gene3D Immunoglobulins 122 229 IPR013783 -
Psa5g4014 899 Gene3D Immunoglobulins 332 383 IPR013783 -
Psa5g4014 899 SMART aamy 419 762 IPR006047 GO:0005975
Psa5g4014 899 MobiDBLite consensus disorder prediction 44 63 - -
Psa5g4014 899 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 127 189 IPR004193 GO:0004553|GO:0005975
Psa5g4014 899 Pfam Alpha amylase, C-terminal all-beta domain 803 893 IPR006048 GO:0003824|GO:0005975|GO:0043169
Psa5g4014 899 SUPERFAMILY Glycosyl hydrolase domain 794 894 - -
Psa5g4014 899 Gene3D - 799 897 IPR013780 -
Psa5g4014 899 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 25 890 IPR037439 GO:0003844|GO:0005978
Psa5g4014 899 Pfam Alpha amylase, catalytic domain 424 492 IPR006047 GO:0005975
Psa5g4014 899 PIRSF GlgB 14 899 IPR037439 GO:0003844|GO:0005978
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4014 Psa-Chr5 317048667 317060132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4014 36 899 Glycoside Hydrolase AT3G20440 72.014 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4014 K00700 - gmx:100780600 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4014 5 317048667 317060132 Psa5g4014 5 317048667 317060132 ECH