Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g3932 | ATGGGGTTCAAACTTTTACCTATATCAGAACCATCTCAAGTTTTTGGAGACTATATAGTTCTAGATCCTCTGGATGAACTTAGAAAGGAATGTGCTGAGTTGATGGCTAATCGGATAACTCGCTTTGATCTCCCAGGACGGCGCTTGGGTGGTTATTCTACTCAACCTCCACTCTCATCTCTGCGTAAAACTGCACTTTCTGCTGCAGAAAAGAGACCGTGGTTGGGATATCGTATTGGTGCTGAAAACCATGTAAAAAAGAAGATAATCCTGGGAAGCTCAAAACCCTCTGAAAATCCTATTCTTGCTTTGGATCCGACATCTCGAAAAAGAAGTCGGGACAAGGATTCAAGTTTATCACTTTATTCACCTAGTAACCCTAAATTTGTTGATTTGACAATGGATACACCAAGTACATCTGGGCCACTATCTGGTGATAATAGAAAACTTCATTATGAAGAAACTGCAACCTGGCAGTGTTTGTCGTGCACTCTGTTAAACAAATCACTAGCCCCTATATGTGACTTGTGCGGCACGGAACAGCCAAAAGTTGTTACTACCAAGCACAACACTTGGTCTTGTAAATTCTGTATGATGGAAAACAGGGAAAAGTTCGAAAGATGCTCAGCGTGTGACGAGTGGAGATACTCTGATGGCCCCAACCTTGGCCCTGACAGAACCATGTAA | 687 | 0.425 | MGFKLLPISEPSQVFGDYIVLDPLDELRKECAELMANRITRFDLPGRRLGGYSTQPPLSSLRKTALSAAEKRPWLGYRIGAENHVKKKIILGSSKPSENPILALDPTSRKRSRDKDSSLSLYSPSNPKFVDLTMDTPSTSGPLSGDNRKLHYEETATWQCLSCTLLNKSLAPICDLCGTEQPKVVTTKHNTWSCKFCMMENREKFERCSACDEWRYSDGPNLGPDRTM* | 229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g3932 | 228 | Gene3D | - | 152 | 190 | - | - | |
| Psa5g3932 | 228 | PANTHER | ZINC ION BINDING PROTEIN | 25 | 75 | - | - | |
| Psa5g3932 | 228 | PANTHER | ZINC ION BINDING PROTEIN | 138 | 222 | - | - | |
| Psa5g3932 | 228 | SUPERFAMILY | Ran binding protein zinc finger-like | 154 | 181 | IPR036443 | - | |
| Psa5g3932 | 228 | SMART | zf_4 | 190 | 214 | IPR001876 | - | |
| Psa5g3932 | 228 | SMART | zf_4 | 156 | 180 | IPR001876 | - | |
| Psa5g3932 | 228 | MobiDBLite | consensus disorder prediction | 100 | 119 | - | - | |
| Psa5g3932 | 228 | ProSitePatterns | Zinc finger RanBP2-type signature. | 192 | 211 | IPR001876 | - | |
| Psa5g3932 | 228 | PANTHER | DNA-DEPENDENT METALLOPROTEASE WSS1 | 138 | 222 | - | - | |
| Psa5g3932 | 228 | PANTHER | DNA-DEPENDENT METALLOPROTEASE WSS1 | 25 | 75 | - | - | |
| Psa5g3932 | 228 | ProSitePatterns | Zinc finger RanBP2-type signature. | 158 | 177 | IPR001876 | - | |
| Psa5g3932 | 228 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 188 | 217 | IPR001876 | - | |
| Psa5g3932 | 228 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 154 | 183 | IPR001876 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa5g3932 | Psa-Chr5 | 310071651 | 310072830 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g3932 | K22685 | - | gmx:100795976 | 179.489 |
Event-related genes