Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3855 ATGTTAGAGGCTTCTCAATTTGCCAAACATTGGTTACCATTTTGCAAGAGATTCAAGGTTGAACCTAGGTCACCAAATGCATATTTCAAGACCTTAGACACTACTAACTCAAACAATGGTAAAGAGCTTTTGGCCATCAAGAAATTGTACCAAGAAATGGAAAGTCGGGTAGAAAAAGCATCAAAGCTTGGTAAAGTACGAGAGGAAGATTACTCAAATTATAAGGGATTTTCTCAGTGGGATTCGTATTCATCTAAGCGTGATCATGACACAATTCTTCACATACTACTTCATAGAAATGACTTGAATGCAAGAGATGAAGATGGAATTGTTATGCCCGCCTTAGTATATTTGGCTCGTGAAAAGAGACCTCACTTTCCACATAACTTCAAAGCTGGAGCCATGAATTCTTTGATAAGAGTGTCATCAATGATCAGCAATGGGAAAATCATTCTGAATGTAGATTGCGACATGTACTCAAACAATCCACAATCTTTAAGAGATGCACTTTGCTTCTTCATGGATGAAGATAAAGGCCATGAAATCGCCTTTGTGCAGGCTCCTCAGAACTTTGAAAATCTTACAAAAAATGATATATACAGCGGTGCTTTCCTTATACCTTATGAGGTTGAAATCTTTGGCATAGATGGATTTGGTGGGCCTATGTATATTGGAACTGGCTGCTTTCATAGAAGAGATGTACTCTGCGGAAGAAAGTTTAACAAACAATACAGAAATGATTGGAACAATGCAAATGATGAAAATATTAACCATAGGATAGAAGCAAGTTTACAAGAGATGGAAGAAAAATCAAAGCCTCTTGCAAGTTGCACCTATGAGGAAAACACATCATGGGGAAAAGAGATGGGACTACTTTATGATTGTGCAGTGGAGGATATAGTGACAGGATTATCGATTTTATGTAAAGGATGGAAATCAGTATGCTATAGTCCAACAAGAAAGGCTTTTCTAGGTTTGTCTCCAACCACATTGCCAGAAGCACTTATTCAACATAAGAGATGGTCAGAAGGAGGTTTTCAAATTGTGCTTTCTAAGTTCAGTACTCTTTGGTACCCTTATGGATTAATAAGTTTAGGCCTTCAACTTGCATATTGTCACTATAATTTATGGGCTTTAAACTCCTTTCCAACTCTATACTATTGCATCATCCCTTCACTTTTTCTCCTCAGAGGCATTCCCTTGTTTCCACAGATTTCAAGTCCATGGTTCATCCCTTTTGCTTATGTGATAGTTGGTGATTCAACATACTGTTTGATAGAGTTTTTGAGGGTAGGAGGAACAATCAAGGGTTGGTGGAATGACTTAAGGATGTGGCTATATAAAAGAACAAGTTCTTACCTTTTTGCTTTTGTTGACACCATGTTGAAGTTTATAGGATTTTCAAATTCAGGATTCATAGTATCTACTAAGGTAGCTGAAGAAGATGTTTCTCAAAGATATGAGAATGAAATTATGGAGTTTGGAAACTCTTCTCCAATGCTCACTTTATTGGCTACAATTGCAATGCTGAATTTGTTTTGTCTTGTTGGGATGTTGTTAAAGGTGGTTGTGTTAAGTGGAGAAGGTTTTAGGATATTTGAGACAATGTTATTGCAAGTTTTACTAAGTGGAGTTTTGGTTGTTATTAATATACCTATTTATGAAGGACTTTTCTTGAGGAAAGACAAAGGAAGAATGCCAGCATCTGTTGTAGTTAAATCAACAACATTAGCTCTAAGTGCATGTGTCCTCTTTAGTGTCCTTAGTTAA 1770 0.3672 MLEASQFAKHWLPFCKRFKVEPRSPNAYFKTLDTTNSNNGKELLAIKKLYQEMESRVEKASKLGKVREEDYSNYKGFSQWDSYSSKRDHDTILHILLHRNDLNARDEDGIVMPALVYLAREKRPHFPHNFKAGAMNSLIRVSSMISNGKIILNVDCDMYSNNPQSLRDALCFFMDEDKGHEIAFVQAPQNFENLTKNDIYSGAFLIPYEVEIFGIDGFGGPMYIGTGCFHRRDVLCGRKFNKQYRNDWNNANDENINHRIEASLQEMEEKSKPLASCTYEENTSWGKEMGLLYDCAVEDIVTGLSILCKGWKSVCYSPTRKAFLGLSPTTLPEALIQHKRWSEGGFQIVLSKFSTLWYPYGLISLGLQLAYCHYNLWALNSFPTLYYCIIPSLFLLRGIPLFPQISSPWFIPFAYVIVGDSTYCLIEFLRVGGTIKGWWNDLRMWLYKRTSSYLFAFVDTMLKFIGFSNSGFIVSTKVAEEDVSQRYENEIMEFGNSSPMLTLLATIAMLNLFCLVGMLLKVVVLSGEGFRIFETMLLQVLLSGVLVVINIPIYEGLFLRKDKGRMPASVVVKSTTLALSACVLFSVLS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3855 589 Coils Coil 250 270 - -
Psa5g3855 589 Pfam Cellulose synthase 2 246 IPR005150 GO:0016020|GO:0016760|GO:0030244
Psa5g3855 589 Pfam Cellulose synthase 274 585 IPR005150 GO:0016020|GO:0016760|GO:0030244
Psa5g3855 589 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 586 - -
Psa5g3855 589 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 86 260 IPR029044 -
Psa5g3855 589 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 586 - -
Psa5g3855 589 SUPERFAMILY Nucleotide-diphospho-sugar transferases 125 392 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3855 Psa-Chr5 303945548 303949184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3855 1 588 Glycosyltransferase AT1G55850 53.480 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3855 - - gmx:100785532 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3855 5 303945548 303949184 Psa5g3855 5 303945548 303949184 ECH