Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3827 ATGGTTGCGAAAATACGTAACACTGCTGCTACCGACTCTCCCTCCCCTACGCCAAAACCAGTGGTTGGAGAGATTGATACCAGTCCACCTTTTCAGTCTGTTAAAGATGCAGTGTCTCTATTTGGTGAAGGTGCTTTCTCAGGGGAAAGACTTATTTTTAAGAAGCCAAAAGGTTATTCTTCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTATCGCATAAAGAGCTGAACAAGTTAAAGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAACTTGAAAGGGCTCAAAGAACAGTCCATGATTTGACACAAAAGCTGAAACTTATTACTGAATCTAGGGAGCTAGCAATCAAGGCAACGGAAGCTGCAAAAACTCAGGTGAAACAAAAGAACGGCGACTCAGATGGAATCAATGGTGCCTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGTTATGCATCTATCATGACAGAACTCAATGCTGCTAAGCAAGATCTGAGGAAAACACGCCAGGAATATGATTCATCCTCTGATGCAAAAGTATCGGCTCTCAAACAAATGGAAGAAGCTGAGAATGCAAAGAAGGAAAACACTGAAAGATTATCTGAGCTGTCGAAAGAAATTTCAGCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCATCCGCAGAAGCGCAGCAACAACAAGCATTGATATTATCTGAAAAAGATGCTCTTAAACAATCATACAAAGCCACTCTTGAACAGTCCGAAAATAAATTACTTGCTTTGAAAAAGGAATTCAATCCCGAGCTCTCAAAAAATCTTGAAGCGCAGTTGGCTGAGACAATGAGCGAAATTGCAGCTCTGCAAAAGGAAATGGAAAACAAAAGGTCTTCCGATTTGGACTCAGTGAAAACGGTTACTTCAGAGCTTGACGGTGCTAAAGAATCACTGCAGAAAGTAGTAGACGAGGAAAACTCTCTTAGAACCTTGGTAGAGACTTTGAAGGTGGAACTAGAAAATGTAAAGAAAGAACATTCTGAATTAAAGGAAAAAGAGGCTGAAACCGAATCCACTGTTGGGAATCTACACGTCAAACTCCGCAAAAGTAAGTCCGAGCTCGAAGCGGTCTCAGCCGATGAATCTAAGGTTAGAGGTGCATCCGAGGAAATGATCTTGACGCTGAGTCAGCTGACATCCGAAACTGAGGATGCACGGCGGGAAGCCGAAGATATGAAGAACAAGACAGCCGAGTTAAAGAAAGAAGCCGAAGCTACTAAACTTGCATTGGAAGAAGCAGAGAAAAAGCTTAAAGAAGCAATAGAAGAAGCAGAAGCAGCAAAAGCGGCTGAAGCTAGTGCTGTCGAGCAGATTACAGTGCTAACCGAAAGGACTAGTGCTGCACGTGCATCAACATCGTCAGAATCCGGATCTGTGATTGCAATCTCGACGGAGGAGTTTGAGTCACTAAACCGCAAAGTCGAGGAATCTGATAAATTAGCAGACATGAAAGTGGATGCTGCCAAAGCACAGGTAGAAGCCGTGAAAGCTAGCGAAAACGAAATTTTGAAAAAATTGGAGGCAACTCAGAAGGAGATTGATGATATGAAAACTGCAACTCAGGAGGCTTTGAAAAGGGCTGAGATGGCTGAAGCAGCAAAGAGAGCAGTTGAGGGTGAGCTTCGAAGGTGGCGCGAACGGGATCAGAAAAAAGCGGCCGAAGCTGCAGCTCGGATATTGGCCGAAACACAGATATCGTTGTCGTCAGAATCATCTCCTCAGCATTATAGGATTCAAAAGCAGAATCTTCCTCCTCCTCATAAAACAGTGGCAGTGAGGAAGTTGGAAAAAGAGAAGGTTTCGTTTTCGAAGAAAGCTGGGTTGCCTAATATTAGTGGTATCTTTCAGAGGAAGAAAAGTCATTTAGCTGAGGGTGGGTCTGCTTCTTATTTGCCTGGTGAGAATCCTGTATAG 1977 0.432 MVAKIRNTAATDSPSPTPKPVVGEIDTSPPFQSVKDAVSLFGEGAFSGERLIFKKPKGYSSERVLAKETQLHVSHKELNKLKEQVKNAETTKAQALVELERAQRTVHDLTQKLKLITESRELAIKATEAAKTQVKQKNGDSDGINGAWKEELETAVKSYASIMTELNAAKQDLRKTRQEYDSSSDAKVSALKQMEEAENAKKENTERLSELSKEISAVKESIEQAKLASAEAQQQQALILSEKDALKQSYKATLEQSENKLLALKKEFNPELSKNLEAQLAETMSEIAALQKEMENKRSSDLDSVKTVTSELDGAKESLQKVVDEENSLRTLVETLKVELENVKKEHSELKEKEAETESTVGNLHVKLRKSKSELEAVSADESKVRGASEEMILTLSQLTSETEDARREAEDMKNKTAELKKEAEATKLALEEAEKKLKEAIEEAEAAKAAEASAVEQITVLTERTSAARASTSSESGSVIAISTEEFESLNRKVEESDKLADMKVDAAKAQVEAVKASENEILKKLEATQKEIDDMKTATQEALKRAEMAEAAKRAVEGELRRWRERDQKKAAEAAARILAETQISLSSESSPQHYRIQKQNLPPPHKTVAVRKLEKEKVSFSKKAGLPNISGIFQRKKSHLAEGGSASYLPGENPV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3827 658 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 8 634 - -
Psa5g3827 658 Coils Coil 159 235 - -
Psa5g3827 658 Coils Coil 273 300 - -
Psa5g3827 658 Pfam Weak chloroplast movement under blue light 24 571 IPR008545 -
Psa5g3827 658 Coils Coil 396 458 - -
Psa5g3827 658 Coils Coil 326 360 - -
Psa5g3827 658 Coils Coil 510 568 - -
Psa5g3827 658 Coils Coil 71 119 - -
Psa5g3827 658 MobiDBLite consensus disorder prediction 1 28 - -
Psa5g3827 658 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 8 634 - -
Psa5g3827 658 Coils Coil 240 267 - -
Psa5g3827 658 MobiDBLite consensus disorder prediction 589 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3827 Psa-Chr5 301403148 301408216 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3827 - - gmx:100794569 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3827 5 301403148 301408216 Psa5g3827 5 301403148 301408216 ECH