Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3826 ATGGGTATGGGAAATCAAGATGCAATTAAGCAGTTGCAGTCTTTGATGGACAATGTTGATGAGCAGAAGAAGATCACATTCAAGAATATGCACCAGGGATATCCGACTGAAACGTTAGGGCGGTTTCTCAAAGCTCGGGACGGGAATGTTGCCAAAGCTCATAAAATGTTAATTGATTGTTTACATTGGAGAGTGGAAAATGAGATTGACAAAGTTTTAGCGAAGCCAATCCCAACGGATTTGTACAGAGCTGTGCGAGATTCTCAGCTCATAGGAATGTCTGGTTACACAAAAGAGGGCCTACCCGTCATCGCTGTTGGCGTTGGGCTCAGTACGTATGACAAAGCATCCGACAAATACTATATACAATCTCACATCCAAGTGAACGAATATAGAGATCGGGTGATCTTGCCAACTGCTACAAAGAAGCATGGAAGATATAGTGGCACCTGCGTGAAAGTCTTGGATATGACTGGTTTGAGATTTTCAGCGCTCAACCAATTAAGGCTATTGACAGCTATATCTACGATAGATGACTTGAACTATCCGGAAAAGACAGACACATACTATATCGTTAATGCACCATATGTATTCTCCGCGTGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAAGAAAATCCAGGTGCTGCAAGGCTGTGGCAAGGACGAATTACTCAAGGTAATGGACTACGGATCTCTCCCACACTTCTGCAAAAAACAAGATTCCAAGTCATCGAGACATAATGCAGTTGCAGCAATTACCGAAAACTGTTTCTCCTTCAACCACGCATTCCATCAACAACTCTATAACCACATAAAGCAGCAAGCTAACTCTGCGGAATCAACACCGCTGATGAGACAAGGATCTTTCTATGTAGACATACCAGAGCCAGACCCGGATGATGCCAAAATAGCCAAAACCATTGAAGTTGAGTTTCACAAATTGGAAAATCAGAACAACGGAAGCGTTGAAGTTGAGTTTCACAAACTGGAAATCCAGAAAAAAGGGTTTACCAACTCGCGAACCGGTCTTGCTGTTAATGGAAGACATTGA 1065 0.4263 MGMGNQDAIKQLQSLMDNVDEQKKITFKNMHQGYPTETLGRFLKARDGNVAKAHKMLIDCLHWRVENEIDKVLAKPIPTDLYRAVRDSQLIGMSGYTKEGLPVIAVGVGLSTYDKASDKYYIQSHIQVNEYRDRVILPTATKKHGRYSGTCVKVLDMTGLRFSALNQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRKKIQVLQGCGKDELLKVMDYGSLPHFCKKQDSKSSRHNAVAAITENCFSFNHAFHQQLYNHIKQQANSAESTPLMRQGSFYVDIPEPDPDDAKIAKTIEVEFHKLENQNNGSVEVEFHKLEIQKKGFTNSRTGLAVNGRH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3826 354 Gene3D - 4 285 IPR036865 -
Psa5g3826 354 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Psa5g3826 354 CDD SEC14 82 240 IPR001251 -
Psa5g3826 354 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Psa5g3826 354 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Psa5g3826 354 Coils Coil 5 25 - -
Psa5g3826 354 PANTHER OS09G0258000 PROTEIN 1 336 - -
Psa5g3826 354 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Psa5g3826 354 SUPERFAMILY CRAL/TRIO N-terminal domain 9 73 IPR036273 -
Psa5g3826 354 SMART sec14_4 78 246 IPR001251 -
Psa5g3826 354 Pfam CRAL/TRIO, N-terminal domain 9 59 IPR011074 -
Psa5g3826 354 PANTHER - 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3826 Psa-Chr5 301398722 301403033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3826 1 330 Acyl Lipid Metabolism Gene Families AT5G47730 65.257 9.59e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3826 - - cam:101507505 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3826 5 301398722 301403033 Psa5g3826 5 301398722 301403033 ECH