Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3813 ATGACAGAAACCGAAACGTTTGCTTTTCAGGCTGAGATCAACCAGCTTCTCAGTCTTATCATCAACACCTTCTACTCCAACAAGGAGATCTTTCTCCGTGAACTTATCAGTAACGCCTCTGATGCTTTGGACAAGATCCGTTTCGAGAGTTTGACAGACAAGAGCAAGCTCGATGGGCAACCTGAGTTGTTTATCCATATCATTCCCGATAAGACTAACAACTCTTTGACCATTATTGATAGTGGTATTGGAATGACCAAAGCTGATTTGGTCAACAACTTGGGTACCATTGCAAGGTCTGGTACCAAGGAATTCATGGAAGCTATTGCTGCTGGTGCTGATGTAAGCATGATCGGACAGTTTGGTGTTGGTTTTTACTCTGCATATCTTGTTGCTGAGAAGGTGATTGTTACCACCAAGCACAATGATGATGAGCAGTATGTGTGGGAGTCCCAAGCTGGTGGGTCCTTCACGGTTACAAGGGATACATCTGGTGAGGTTCTTGGCAGGGGTACTAAGATCACTCTCTACCTTAAGGAAGACCAGCTTGAGTACCTTGAGGAGCGTCGTTTGAAGGATTTGGTTAAGAAGCATTCTGAGTTCATTAGTTACCCAATTTCTCTATGGATTGAGAAGACTATTGAAAAGGAGATTTCTGATGATGAAGACGAGGAAGATAAGAAGGACGAGGAGGGCAAAGTAGAGGAAGTTGATGAAGAGAAGGAGAAAGAGGAGAAAAAGAAGAAGACTATTAAGGAGGTGTCTCATGAATGGGATTTGGTTAACAAGCAAAAGCCTATCTGGATGAGGAAGCCTGAAGAGATTGGAAAGGAAGAATACTCTGCTTTCTACAAGAGTCTTACTAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAACTTGAGTTTAAGGCTGTTCTCTTTGTACCCAAGAGAGCACCCTTTGACCTTTTTGACACCAAGAAGAAGCCCAACAACATTAAGCTCTATGTTCGCAGGGTCTTTATCATGGACAACTGTGAAGAGTTGATTCCTGAGTATCTTGCCTTTGTTAAGGGTATTGGAAAGATTGCTGAACTTCTCAGGTACCACTCCACCAAGAGTGGTGATGAGCAGACCAGTCTTAAGGATTACGTCACAAGGATGAAGGAAGGCCAGAGTGACATCTACTACATTACTGGTGAAAGTAAGAAGGCTGTTGAGAATTCTCCATTCTTGGAGAAGTTGAAGAAGAAGGGATATGAAGTTCTATATATGGTTGATGCTATTGATGAGTATGCTGTTGGTCAACTCAAGGAATTTGAGGGAAAGAAGTTGGTATCTGCTACCAAGGAAGGTTTGAAGCTTGAAGAAACTGAGGATGAGAAGAAGAAACAGGAAGAATCAAAGGAGAAGTTTGACAATCTTTGCAAGGTGATTAAGGAGGTTTTGGGTGACAAGGTTGAGAAGGTTATTGTTTCAGACCGTGTTGTTGATTCACCATGCTGTCTTGTAACTGGTGAATATGGCTGGACTGCTAACATGGAGAGAATCATGAAGGCTCAGGCATTGAGGGACAGCAGCATGGCTGGTTACATGTCAAGCAAGAAAACAATGGAGATCAACCCAGAGAACTCAATCATGGAGGAGCTGAGGAAGCGTGCTGATGCTGACCGCAATGACAAATCTGTGAAGGACCTTGTTCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGGTTCAGCCTTGATGAGCCAAACACCTTTGGAAACAGGATCCACAGAATGTTGAAGCTTGGATTGAGCATTGATGATGATGCCACTGAAGCTGATGCCGATATGCCTCCATTGGAGGAAGCTGATGCAGATGCCGAAGGAAGCAAGATGGAAGAGGTTGATTAA 1896 0.4362 MTETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNSLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDTSGEVLGRGTKITLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEDEEDKKDEEGKVEEVDEEKEKEEKKKKTIKEVSHEWDLVNKQKPIWMRKPEEIGKEEYSAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELIPEYLAFVKGIGKIAELLRYHSTKSGDEQTSLKDYVTRMKEGQSDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLEETEDEKKKQEESKEKFDNLCKVIKEVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMEELRKRADADRNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDDDATEADADMPPLEEADADAEGSKMEEVD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3813 631 PANTHER HEAT SHOCK PROTEIN 81-2 361 629 - -
Psa5g3813 631 PANTHER HEAT SHOCK PROTEIN 81-2 1 359 - -
Psa5g3813 631 SMART HKATPase_4 27 182 IPR003594 -
Psa5g3813 631 Gene3D - 363 449 - -
Psa5g3813 631 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 361 629 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 359 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 181 IPR003594 -
Psa5g3813 631 Coils Coil 454 474 - -
Psa5g3813 631 Coils Coil 227 257 - -
Psa5g3813 631 Hamap Chaperone protein HtpG [htpG]. 2 596 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 CDD HATPase_Hsp90-like 14 202 - -
Psa5g3813 631 Pfam Hsp90 protein 184 359 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 Pfam Hsp90 protein 361 621 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 MobiDBLite consensus disorder prediction 219 248 - -
Psa5g3813 631 MobiDBLite consensus disorder prediction 219 238 - -
Psa5g3813 631 Gene3D - 262 362 - -
Psa5g3813 631 MobiDBLite consensus disorder prediction 605 631 - -
Psa5g3813 631 Gene3D - 450 600 IPR037196 -
Psa5g3813 631 SUPERFAMILY Ribosomal protein S5 domain 2-like 263 450 IPR020568 -
Psa5g3813 631 Gene3D - 2 229 IPR036890 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 170 187 IPR020575 -
Psa5g3813 631 PRINTS 90kDa heat shock protein signature 188 206 IPR020575 -
Psa5g3813 631 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Psa5g3813 631 PIRSF HSP90_HTPG 1 359 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 PIRSF HSP90_HTPG 360 631 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa5g3813 631 SUPERFAMILY HSP90 C-terminal domain 473 595 IPR037196 -
Psa5g3813 631 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4 212 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3813 Psa-Chr5 300613514 300616776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3813 K04079 - gmx:100819568 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3813 5 300613514 300616776 Psa5g3813 5 300613514 300616776 ECH