Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3805 ATGTTTGCTTGGATAAAGATGGATGCGAAAAATTCTCTACAAATAACAAGAATAGAATCTGTTGCTTATGATGATGATGGACGTGCCAAAAGAACTGGAAATGTGAAGAGTGCTGTGGCTCATATCATTACCGCGGTTATTGGGTCTGGTGTTTTGTCGTTGGCATGGAGTATTGCTCAATTAGGATGGATTGGAGGGCCAATTGCCTTGATTTCTTGTGCAATGGCTACCTATATTTCTTCATTTCTTTTGTCTGATTGTTACAGAAATCCTGACCCGGTGACTGGGAAAAGAAACTACTCTTACATTGATGCTGTTAGAGTCAATCTTGGTATGAAAAGGACATACGTGGCTGGTTTCCTTCAATTCTTGAGCTTGTATGGGACTTGCGTTGCCTATGTAATTACCACAGCAATCAGTATGAGGGCTATTATGAGATCAAATTGTTATCACAAGAAAGGGCGCGATGCTCCTTGTAGTTACGGCGGAAATTTGTATATGATGCTGTTTGGACTTGTTCAGATTGTTATGTCATTCATACCGGATCTCCATAACATGACTTGGGTTTCAGTTGTTGCGGCAATAATGTCTTTTTCATACTCAATCATTGGACTAGGACTCGGTATAGCAACAGTCATAAAAAATGGAAGATTTCTGGGAAGTTTGAAAGGAGTACAAACTGCTAATGTTGCTGACAAAATCTGGTTAATCTTCCAGGCAATTGGTGACATTAGCTTTTCCTATCCATACCCAATGCTCCTTCTTGAGATACAGGACACTTTGGAGTCTCCTCCATCAGAGAATCGAACCATGAAAAAGGCCTCCGTGATTTCAATCTCCATTACGACATTCTTCTACCTATGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGCTGCACCAGGAAATCTATTGACAGGGTTTGGATTTTACGAGCCTTATTGGCTTATAGACTTTGCCAATGTTTGCATTATCATTCATTTGGTTGGAGGATATCAGATATACAGTCAACCAATATATAGTACTGCTGATAGATGGTGTTCCAAAAAATTTCCCAAGAGTGGCTTTGTGAATGATTTTCGCAGAGTGAAACTTCCTCTATTACCTGCTTTTGAGGTAAATCTTTACAGGTTTTGTTTTAGAACAACCTACGTGATTTCAACCACTGGACTTGCAATTTTATTCCCTTACTTCAACCAAGTTCTTGGAGTATTAGGAGGCATAAATTTCTGGCCATTGGCTATATATTTCCCAGTTGAGATGTACTTTGTACAGATGAAAATTGGAGCTTGGACTGGAAAATGGATTGCTCTCAGAATATTTAGCTTTGCATGCTTTCTTGTAACAATCGTAGGATTAATTGGTTCGTTTGAAGGAATCGTTCGGGCTAAACTCAGCGGAAAAAGTCATTGA 1416 0.3941 MFAWIKMDAKNSLQITRIESVAYDDDGRAKRTGNVKSAVAHIITAVIGSGVLSLAWSIAQLGWIGGPIALISCAMATYISSFLLSDCYRNPDPVTGKRNYSYIDAVRVNLGMKRTYVAGFLQFLSLYGTCVAYVITTAISMRAIMRSNCYHKKGRDAPCSYGGNLYMMLFGLVQIVMSFIPDLHNMTWVSVVAAIMSFSYSIIGLGLGIATVIKNGRFLGSLKGVQTANVADKIWLIFQAIGDISFSYPYPMLLLEIQDTLESPPSENRTMKKASVISISITTFFYLCCGCFGYAAFGNAAPGNLLTGFGFYEPYWLIDFANVCIIIHLVGGYQIYSQPIYSTADRWCSKKFPKSGFVNDFRRVKLPLLPAFEVNLYRFCFRTTYVISTTGLAILFPYFNQVLGVLGGINFWPLAIYFPVEMYFVQMKIGAWTGKWIALRIFSFACFLVTIVGLIGSFEGIVRAKLSGKSH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3805 471 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 465 - -
Psa5g3805 471 PANTHER OS05G0424000 PROTEIN-RELATED 9 465 - -
Psa5g3805 471 Pfam Transmembrane amino acid transporter protein 32 460 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3805 Psa-Chr5 299950736 299952856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3805 24 449 Organic Solute Cotransporters AT1G77380 53.271 4.88e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3805 K24917 - gmx:100781077 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3805 5 299950736 299952856 Psa5g3805 5 299950736 299952856 ECH
Psa5g3805 5 299950736 299952856 Psa2g0127 2 4860368 4864336 PCT