Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3797 ATGCATCTCTACAATGCATGGTTGCCGCCACCCGTGGCGGCTCAGACCGCCGCCGAGAGAGACTCCTTCGCTCGCATCATCGCTGCCGTCAACTCGTCTTTCAACCGCGACGATCCCGAATCCGTTTATTCAACTCTCAAATACATCTCCGTCCTTGACCTTTTCATAAAGGCGAAAAGTGTTGTGTCTTTGGAGGATGTCCGCACCCTTATTCAGACCGGCCTTGAACTATTTCACATGTCTCGTAATAAGCTTTACGCCCAGGTTAGGTGGGGGAATTTATTAGTCAGACTACTCAACAAGTATAGGAAAAAGATTGCACTGACTATTGAATGGAGGCCTCTGTATGATACACTGGTTAGCACACATTTTACCAGAAGTACAGGCCCAGAAGGTTGGAGAGTAAGACAACGGCATTTTGAAACTATAACTTCACTTGTTCAGTCATGCCGAAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAGTCTTTATTGCAAAACCCATGGCATAATTCATCCTTCGAAGGATCTGGGTTCGCTAGACTGTTTCTCCCAACAAATCTGGATAATCAGGCCTTTTATACACATGATTGGATTACAGAGTGTCTAGACTTGTGGGAGTCTATACCAAATTGCCAATTCTGGAACAGTCAGTGGGCGGATGTCATAGCCCGTGTTGTAAAAAATTACCACAATGTTGATTGGGAGGGTCTCTTGCCTTTGCTTTTCGCTAAATACTTAAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTTTTCACTGGATGTCCCAAGAAACACAAGGTTCTTGTTTTCCAATAGAACTTCCACCCCTGCAAAGGCTATCTCCAAGTCGATTGTATATTTGCTAAAACCTGGTAGTTCTGCAAAACAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGTTGGACTTACTCACTGGAGAGGTTTTTGTTTCACTTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAGCAGTTGGGCATAAATAATTGTAGACCTACTGAACAGCATCTTGGAGAATCAGAAAGGGTCTTCTTTGTGAACACAATGCTTAAGTTAATTGATCGGGGACAATACAGCAAGAATGAGCACCTCTCTGAGACAGTTGCCGCAGCAACTTCTATACTTTCTTATGTGGAACCCTCATTGGTCCTTCCATTTGTGGCATCTCGGTTTCAAATGGCCCTTGAGACGATGACTGCCACCCATCAGTTGAAAATTGCAGTTATGTCGGTAGCATTTGTTGGGCGTTCGCTATTTTATACATCTGTATCAGCTTCTTCCATGAAAAAAGTGGATCTTGGTAGTGGTGATGAAACATTCATTGATCTTATTGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCTAACGACCCTCCGAAAACTTTAGCTACCATGCAATTAATTGGTTCCATATTTTCAAATTTGGCTTTATTGGATGATAAAATTGATGACTTATCCTTTATGCCAATGATCCGTTTTTCTGAATGGCTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTTTAAATGAAGGTCTTCACTCATCAGCTTCGTCAGGAACTTTCCTAGTTGATGATGGTCCATACTACTTCTGTGTTCTTGAAATTCTTCTTGGGAGGCTTTCAAAATCACTGTATAATCAGGCCTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCTGGTGCTATTGCAGAGGTTGGTCTGCTGTGTTGTGCGTGTGTTCATTCCAACCCGGAAGAAGGAGTCAGTCAACTTGTTGAGCCAATCTTAGTGTCTGTGATATCCTCTTTGAAAGGAACACCAGGCACTGGATTTGGAGGAGCTGGGACTTTTGATACTTCTGCTTCAACCAAGATTAGGTCCACAATTTCACCTGCTCTTGAGGCTGCAATTGACTATCAACTAAAGATATTATCAGTTGGCATCACATATGGAGGTCCAGCACTCCTCCGCCACAAGGATCAATTAAAAGAAGCTATCTTTTTGGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCACTATTATCCAATAGACCAATATAAGTGTGTTCTTAGTCACCCTGATGCTGCTGCTCTTGAAGAGTGGATTAGCACAAAAGATTTTTCCACTGATGAAAGGTTGATTCCAAAGTGGCATATTCCTTGTGATGAAGAGATTCATTTTGCAAACGAGCTTTTAGATATTCACTTTAAGTCTGCTTTGGATGATCTGTTGAAAATATGCCAAACTAAAATTCATGCTGATCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGTATTGAATCATCATTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTCCCAGATTCTAGGAATGGAATGGTTGAAGATCCAAACCATACATTTCTAATTGCTGGGGCAACAGGCTGTACTGTTGGAACTACTGCTCTGAGAGAAAAAGCTACCGAGATTGTACATGCAGCCTGCAAATATGTCCTCGAGAATAAATCCGATGACAGCATTCTGTTGATACTCATCATTCGAATTATTGACGCTTTGGGAAATTACGGAAGTTTAGAATATGATGAGTGGTCTAGTCACAGACAGGCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCACCCATTAATTTTATTGTGTCATCCCATTCTAAAGGAAAGAAGAGACCTAGGTGGTCTCTTATTGACAAGGCATTCATGCACAATACCTGGAGGTCTTCACAAGCATCCTATCATCTTTACCGTACAAGTGGGAATTACTGCCCATCTGAACACGTGACTATATTGATGGATGATTTGTTGAGTCTTTGTTTGCATAGCTATGAAACCGTCCGCCTGCTTGCAGGGAAATCTCTAGTGAAGCTGATCAAGAGATGGCCATCTATGATTTCAAAATGTGTCATCACCCTTACTCCTAACTTGCAGGACCCCAATGCCAAGGAGTATTCAGTCTTGGGTTCTTGTTCAGTCCTTGCCTCACAGACAGTTCTCAAGCATTTGACTACGGATCAAAAGTCCTTCTCTTCATTTATCTTGTCAATTCTTTCCAGTTCTCATCACGAATCCTTGAAATCTCAGAAAGCAATTAATGAGCTTTTTGTGAAGTACAACATCCAATTTTCTGGAGTATCTCGAAGCTTTTTCAGGAAATCAGACACAGAGAAGCATACTGGTGGACTGGGTTTTTCCGATTTGGTTTCTCAGATTGGTTCGATGAGTTTTGACTCTACTGGCTTGCATTGGCGGTATAATTTGATGGCTAACAGAGTACTTCTCTTGCTGGCTTTGGCGTCTCGGAGCCATCCAAATTCATCATCTAAAATCCTGAGTGAAGCTGCTGGTCACTTCTTGAAGAATCTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCTATTTCAGCTCTGAATACATTATTAAAGGAATCACCTTATAAGCTGTCTGCTGGTGAGAAATCTGATGTACTCAAGGATTTGAAAGGCCATGTCAAGTCATCCCTTGAAGGAGCTTTAACCCAAACGTTTCAGGAAGATGGTTTCTTCAATGATACACTCACCAGTCTATCTCATGTTCATATAATAACTGATAACGAATCTGCTTCAAGAGGAAATCAAGGAGATTCCAGTATTCAAAGCTTAGCAGACAAATCCATAACCCGATTTTATTTTGAATTTTCGGCTTCATGGCCACGTACTCCTAGTTGGATCTCCTTTTTAGGAAGTGATACATTCTACTCAAGTTTTGCTCGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTGTAGTGTTGGCACTTAAAGGTGCAGTAGATGAGTTTACAATTGCCAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTGGCAGGTGTGTTACATTCTGATATTGACGGTCTATCAGGAGCGTGGGAAAGCTGGCTGATGCCACAGTTGAAGAATATAATTTTAGCACCATCTGTTGAATCAGTTCCTGAGTGGTCCTCTTGCATAAGATATGCAGTTACTGGTAAAGGAAAGTATGGAACAAGAGTTCCTCTTTTGAGACAAAAAATTCTGGATTCCTTGATGGCACCTTTACCTCCAACAGTAGCTACGACTGTAACATCCAAGCGATATGCTTTTCTGGCTGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTAGCTGAAATCCAGCTCCACAATACACTTCTGAAGGAAGTTCTTGGTAACATGTGCCACTCCTCAGCCCAAGTAAGGGAGGCTCTAGGGGTTACCCTTTCTGTATTGTGCTCTAATATTCGGCTATATCATTCAACTGATCATGATAGTGTGGATGATGAGAGAACCAACAATGTTGATAATAATTTGATAAAAGATGAAAGCTGGGTTCAGTATCTTATAGAGAGAGCAGCTGAAGCAGTTGTGAACATTCAGATTGCTTCCCAATCAGATAAAGCTGTGAATCCGATAGATACAAGTTCTCAAAATGGTCATGTAGATGGTGATTCACAAAATGATATGAAATGGATGGAAACGCTACTCTATTTCATCATCTCGTCATTGAAGTCTGGGAGATCCTCTTATCTTCGCGATGTGATTGTGGGACTTCTTTATCCTGTGATTTCCTTGCAGGACACATCAAATAAGGATTTGTCAACATTAGCCAAGGCAGCATTTGAATTACTAAAATGGATGATTGTCTGGGAACCTCACCTCCAGAAGGCCATAACTGTGATTCTTTCTGCTGCTAATGATTCCAACTGGCGAATTAGATCTGCTACATTGACATATCTGCGTACTTTCATGTACAGGCACACATTCATTCTCTCAAGTTCTAAGAAACAAGAAATTTGGAGAACAGTTGAGAAGTTACTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGCTTAATGAAGGGTGGGGATGAAGATCTTGCTAAAGATTTCCGTGATCGAGCTTATGTTGGGGCAAATATTGTACAAAAGAGAAGAAAATCGAGAAATGCAAGCTCTGGTTCATCAGTAGCATCTATTCATGGTGCTGTATTAGCTTTGGTAGCTTCTGTATTATCAGCCCCGTATGATATGCCAAGTTGGTTACCTGAGCATGTTACTTTACTAGCCCGTTTTAGTGGGGAGCCATCTCCAGTGAAATCAACTGTTACAAAAGCTGTTGCAGAGTTCAGGCGAACCCATGCTGATACATGGAATGTTCAGAAAGAGTTATTCACTGAAGAGCAACTTGAGATTCTGGCGGATACATCCTCTTCATCATCATATTTTGCTTGA 5454 0.414 MHLYNAWLPPPVAAQTAAERDSFARIIAAVNSSFNRDDPESVYSTLKYISVLDLFIKAKSVVSLEDVRTLIQTGLELFHMSRNKLYAQVRWGNLLVRLLNKYRKKIALTIEWRPLYDTLVSTHFTRSTGPEGWRVRQRHFETITSLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNLDNQAFYTHDWITECLDLWESIPNCQFWNSQWADVIARVVKNYHNVDWEGLLPLLFAKYLNMFEVPVANGSGSYPFSLDVPRNTRFLFSNRTSTPAKAISKSIVYLLKPGSSAKQHFEKLVNILEQYYHPSNGGRWTYSLERFLFHLVIQFQKRLQNEQLGINNCRPTEQHLGESERVFFVNTMLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFQMALETMTATHQLKIAVMSVAFVGRSLFYTSVSASSMKKVDLGSGDETFIDLIGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVLNEGLHSSASSGTFLVDDGPYYFCVLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEGVSQLVEPILVSVISSLKGTPGTGFGGAGTFDTSASTKIRSTISPALEAAIDYQLKILSVGITYGGPALLRHKDQLKEAIFLAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYKCVLSHPDAAALEEWISTKDFSTDERLIPKWHIPCDEEIHFANELLDIHFKSALDDLLKICQTKIHADQGDEKEHLKVTLLRIESSLQGLFSCLPDFVPDSRNGMVEDPNHTFLIAGATGCTVGTTALREKATEIVHAACKYVLENKSDDSILLILIIRIIDALGNYGSLEYDEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKKRPRWSLIDKAFMHNTWRSSQASYHLYRTSGNYCPSEHVTILMDDLLSLCLHSYETVRLLAGKSLVKLIKRWPSMISKCVITLTPNLQDPNAKEYSVLGSCSVLASQTVLKHLTTDQKSFSSFILSILSSSHHESLKSQKAINELFVKYNIQFSGVSRSFFRKSDTEKHTGGLGFSDLVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASRSHPNSSSKILSEAAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSAGEKSDVLKDLKGHVKSSLEGALTQTFQEDGFFNDTLTSLSHVHIITDNESASRGNQGDSSIQSLADKSITRFYFEFSASWPRTPSWISFLGSDTFYSSFARIFKRLVQECGMPVVLALKGAVDEFTIAKERSKQCVAAEALAGVLHSDIDGLSGAWESWLMPQLKNIILAPSVESVPEWSSCIRYAVTGKGKYGTRVPLLRQKILDSLMAPLPPTVATTVTSKRYAFLAAALIEISPQKMPVAEIQLHNTLLKEVLGNMCHSSAQVREALGVTLSVLCSNIRLYHSTDHDSVDDERTNNVDNNLIKDESWVQYLIERAAEAVVNIQIASQSDKAVNPIDTSSQNGHVDGDSQNDMKWMETLLYFIISSLKSGRSSYLRDVIVGLLYPVISLQDTSNKDLSTLAKAAFELLKWMIVWEPHLQKAITVILSAANDSNWRIRSATLTYLRTFMYRHTFILSSSKKQEIWRTVEKLLVDNQVEVREHAAAVLAGLMKGGDEDLAKDFRDRAYVGANIVQKRRKSRNASSGSSVASIHGAVLALVASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA* 1818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3797 1817 Pfam Proteasome-substrate-size regulator, mid region 520 825 IPR032430 -
Psa5g3797 1817 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Psa5g3797 1817 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1817 - -
Psa5g3797 1817 Pfam Domain of unknown function (DUF3437) 1732 1817 IPR021843 -
Psa5g3797 1817 Gene3D - 1561 1707 IPR011989 -
Psa5g3797 1817 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1817 IPR035309 GO:0016504|GO:0070577|GO:0070628
Psa5g3797 1817 SUPERFAMILY ARM repeat 885 1699 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3797 Psa-Chr5 299392063 299413235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3797 K06699 - gmx:100814812 3225.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3797 5 299392063 299413235 Psa5g3797 5 299392063 299413235 ECH