Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3777 ATGGCTCTCCTCAGCGCCCCTCCTCAACAGCAACAACATCAACAACATCAACAACATCAACAACAACAACAACCCGTTTCCATCTCTGTTCCATTCTCTTCCGATTACGGTGCTGCTGCTAATTTGCCTTCGCCATCGCAACTGGTTACTCCCTCTGCCTCTGCCGCCTCCATTACAGCCGCCAATGCAGCCGCTGCCGCTCTGATTCGGCTTCCTAGCAGTAAGGTTCCTAAGGGAAGGCACTTGATTGGGGACCATGTTGCGTATGACGTGGATGTTAGGTTGCCCGGTGAAGTACAGCCTCAGCTTGAAGTTGCTCCCATTACAAAATATGGGTCCGATCCTAATCCGATTCTCGGTAGGCAGATTGCTGTGAATAAGTCTTATATATGTTATGGGTTGAAACAGGGGAATATTAGGGTGCTTAACATTCACACTGCAGTTAGATCTTTGCTTAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATTTGCTGGCTAGTGTTGGCACAGATGGATGTGTCTTTGTATGGAAAATTTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTATTCAAATAGTAGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTCTGAGAATTGACACCACCAAAATTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCTCCGAAATGTCCCCTTGACAAGCTCATTGATGGGGTTCAGCTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAGTCGACTGGTATCTGCATCACAGGACGGCACGATAAAGATATGGGAAGATCGGAAGGCACAACCTCTTGCTATTTTGAGACCTCATGACGGGCATCCTGTTTTTTCCGCTACGTTTTTTACTGCTCCTCACCAGCCTAATCATATTGTCCTTATCACAGCGGGACCGCAAAATCGGGAAGTGAAACTCTGGGTATCATCAAATGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAATCTTGGAAATGTACTCAGACTTTGGAGTTGAAGAGTTCAGCTGGGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTTATGCAGGTCTGCTTTTACTTGCTAATGCACAGAGGAATGCTATATATGCTGTGCACTTAGGATATGGTCCTAATCCCGAATCAACTCACATGGATTATATAGCCGAGTTTACCGTCACCATGCCTATTCTGAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGCGAACATATTGTTCAGGTTTATTGTGTTCAGACATTGGCTATTCAGCAGTATGCCTTGGATTTAGCACAATGCTTGCCTCCGCCATTGGAACATGCAGGACTAGATAGGTTAGATTCCAATGTTTCACGAGATGCAGTTATTGCTGAAGGGTTCGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGCCTTTACCTAGTTCTACTCCCAAAATAACTATGCAAGCAAGTAGCACTGAGAGTGGTCTTGTGGCAAGATACCCTTTAAGTTCGGGTCATATTGAGGCACCTATTTCTAGAGAAATCAGCAGTTCAAACAGTGAAGCTAAAACTGTTACATTGGTTCCTTCTAGTAGTGATGCTAATATTGTTTGTGTTCCTTCTCCACCTCTTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAATCCACAATCTAACTTGAGCGATCATGTTGGGGACCAAGCTCTTAATGATTATTCAGTTGAAAGACAAATGGATACCATTCACCGGAACTTGTCCGACCAATTGAATAGTGATTCAAAGAATGATGAAAATAAAATCAAACAAGATGACATTTCTAGTGTACTTAGCCCTTCTGTCGTGTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATAACAAAAGCCAGTTCCCCGTCTGAGACTAATATGATCGATAGAATGAGTGAACTAGAAACTAAGATCCAGGATGTGGGTAATGCAGAAGTAGAGGTGAAAGTGGTAGGTGAGGCAAGGCCTAATCAAAATGATGAATTTGGAAGGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCAATGAGGTGGCCCGAGAATTTTGTGCGATAGGTGGGGAAACTTACATTACAGAGGAACCCGGACAGGTTGATTCTACTGGAGGGGATTCACTGGCACAACCCTCTAATGCAGCCGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCCGACTCATCTACATCAGCGGTAGTACCACCGTCACCTTCTTCTAATACAAAAGGAAAGAGACAAAAAGGTAAAAATCCTCAACCAACAGGTCCGTCTTCCCCATCTCCAAGTGTATGCAATTCAACTGATTCGTCCAATGAGCCAAATGGAATTTCAAATCTCCCATCTACTGAAAATGGTTTGCCTCAAATTATGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTTGCAGTTCCAGTTACCAAAGAGGGTAGAAGGCTTGAAGCCGCCCTAGGGAGAAGCATGGAAAAAGCTGTCAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATTCAACATGTTACAGGTTTGATTACTAACTTCACGAACAAGGATCTACCAGCAATATTGGAGAAAACTATAAAGAAGGAAATGGCTTCAGTTGGGCAAGCTGTAATTCGTTCAATGTCTCCTACTATTGAGAAAATAATATCCTCTACTATAGTGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATTCAAAACTCGAAGCTACCGTAGCTAGGCATATCCAAGCACAGTTTCAGACAACTGCCAAACAGGCGCTTCAGGATGCACTCAAATCCAGTTTTGAAACATCAGTGGTTCCTGCATTTGAGATCTCCTGCAAAACCATGTTTGAGCAAGTGGATGCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAACAACGCCTTGAATCTGGGCCTACTTCATTGGCAATGACTCTAAGGGATTCCATTAATTCAGCTTCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGCCAGAGAAAGCTAATGTCACTTGCAACCTCAAGAACAAGCTCAGGCACATTGAGTACTCTGCCCATCCAGCTGAACAATGGTCCATTACTTCATGAAAAGGTTGAGGCGCCTCTAGATCCCACAAAGGAGCTATCAAGATTGATTTCTGAACGGAAATATGAGGAGGCATTTATTGCAGCATTGCATAGAAGTGATGTATCTATTGTATCATGGTTATGCTCTCAGGTATGCCCGAAATGTTTCCTTATTTTAAATTTAACAGACAGTTCTCTCCTGTTAGAATGCGTTTCTTTAATCATTTCCCTGGATCGGATTAGGGTGTGTAGAAATTTTAATGGAGTAGAGGGTAAGCATTCAATGAGATATTTTATTTAG 3699 0.4317 MALLSAPPQQQQHQQHQQHQQQQQPVSISVPFSSDYGAAANLPSPSQLVTPSASAASITAANAAAAALIRLPSSKVPKGRHLIGDHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPILGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGCVFVWKISEGPDDEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKIGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTSRLVSASQDGTIKIWEDRKAQPLAILRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSSNEEGWLLPSNTESWKCTQTLELKSSAGPSLKDAFFNQVAALPYAGLLLLANAQRNAIYAVHLGYGPNPESTHMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLEHAGLDRLDSNVSRDAVIAEGFASLDSSAGRTSEMPLPSSTPKITMQASSTESGLVARYPLSSGHIEAPISREISSSNSEAKTVTLVPSSSDANIVCVPSPPLPLSPRLSRKLSDFRNPQSNLSDHVGDQALNDYSVERQMDTIHRNLSDQLNSDSKNDENKIKQDDISSVLSPSVVFKQPTHLVTPSEITKASSPSETNMIDRMSELETKIQDVGNAEVEVKVVGEARPNQNDEFGRQGPQQNPVSDGKEKFFCSQASDLGNEVAREFCAIGGETYITEEPGQVDSTGGDSLAQPSNAAEDGLQDLPKDVHEKVSDSSTSAVVPPSPSSNTKGKRQKGKNPQPTGPSSPSPSVCNSTDSSNEPNGISNLPSTENGLPQIMAMQDSLNQLLTMQKEMQKQMTMTVAVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRIQHVTGLITNFTNKDLPAILEKTIKKEMASVGQAVIRSMSPTIEKIISSTIVESFQRGVGDKAVNQLDKSVNSKLEATVARHIQAQFQTTAKQALQDALKSSFETSVVPAFEISCKTMFEQVDATFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMSLATSRTSSGTLSTLPIQLNNGPLLHEKVEAPLDPTKELSRLISERKYEEAFIAALHRSDVSIVSWLCSQVCPKCFLILNLTDSSLLLECVSLIISLDRIRVCRNFNGVEGKHSMRYFI* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3777 1232 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 152 189 - -
Psa5g3777 1232 ProSiteProfiles Trp-Asp (WD) repeats profile. 152 194 IPR001680 GO:0005515
Psa5g3777 1232 MobiDBLite consensus disorder prediction 717 731 - -
Psa5g3777 1232 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 313 IPR001680 GO:0005515
Psa5g3777 1232 SMART WD40_4 145 185 IPR001680 GO:0005515
Psa5g3777 1232 SMART WD40_4 267 304 IPR001680 GO:0005515
Psa5g3777 1232 SMART WD40_4 307 353 IPR001680 GO:0005515
Psa5g3777 1232 Gene3D - 109 451 IPR015943 GO:0005515
Psa5g3777 1232 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 10 1185 IPR045152 GO:0031087
Psa5g3777 1232 SUPERFAMILY WD40 repeat-like 121 406 IPR036322 GO:0005515
Psa5g3777 1232 MobiDBLite consensus disorder prediction 793 846 - -
Psa5g3777 1232 MobiDBLite consensus disorder prediction 1 27 - -
Psa5g3777 1232 MobiDBLite consensus disorder prediction 799 846 - -
Psa5g3777 1232 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 105 417 IPR032401 -
Psa5g3777 1232 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 10 1185 - -
Psa5g3777 1232 MobiDBLite consensus disorder prediction 710 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3777 Psa-Chr5 297336937 297345207 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3777 K12616 - gmx:100798228 1850.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3777 5 297336937 297345207 Psa5g3777 5 297336937 297345207 ECH