Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3277 ATGAAACGGTTTTTCCAAGTAGTAGAAAAAGATCCAGAGAAAGCTTTGAAGAAAGCGAAAGAGAATGAAAAACAAGAAAACGAAAACGAAAACGAAAACGAAACGAACAAGGAAGAACCATTGAAGTTCGTGACTTGGAACGCCAACAGTTTATTCCTTCGCGTCAAGAACAATTGGTCCGAGTTTTCCAACTTCATCACCACCTTCGATCCCGATGTCATTGCCATTCAAGAAGTTCGAATGCCCGCTGCTGCTTCCGGTTCCCAATCCAAGTCCGCTCCTAAAAATCAAGGTGAAATTAAAGATGATACTAACTCCGCTAGGGAAGAAAAAAGGATATTGATGCGGGCACTTTCAAATTCACCGTTTGGGAACTATCGTGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCACTGTTTGTGAAAAAATGTTTCAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAAATAGTTTCAAAGCATGAACCAGATGGCCGAGTAATCTTAATTGAATTTGAAACATTTCGTTTATTGAATACATATGTACCAAATAATGGGTGGAAAGAGGAGCCAAACTCATTTCAAAGGAGAAGAAAATGGGACAACAGAATCCTGGAATTTGTTCACCAAAATTCAGACAAGCCTTTGATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGAGTTTTTCAGTACAGCAAAACAAAATGGTTATGTTCCTCCAAATAAAGAGGATTGCGGGCAGCCTGGATTTACCTTGGCTGAAAGAGCACGATTTGGTACCATCTTAAGAGAGGGAAAGTTGGTAGATGCCTACAGATTTCTGCACAAGAATAAGGACATGGAGCAGGGCTTCTCATGGTCTGGAAACCCGATTGGGAGGTACCGTGGAAAACGCATGAGAATAGACTATTTTTTAGTTTCAGAAAAACTTGAAGAAAAGATTGTTGCGTGTGATATGCTCGGACAAGGGATAGAGTTAAAAGGTTTCTATGGAAGTGATCATTGCCCAGTTACCTTGGAGCTCTCTCCTAGTTCCAACTCTCAAAATGAGGATCCTGTATAA 1095 0.4064 MKRFFQVVEKDPEKALKKAKENEKQENENENENETNKEEPLKFVTWNANSLFLRVKNNWSEFSNFITTFDPDVIAIQEVRMPAAASGSQSKSAPKNQGEIKDDTNSAREEKRILMRALSNSPFGNYRVWWSLADSKYAGTALFVKKCFKPKSVVFNLDKIVSKHEPDGRVILIEFETFRLLNTYVPNNGWKEEPNSFQRRRKWDNRILEFVHQNSDKPLIWCGDLNVSHEEIDVSHPEFFSTAKQNGYVPPNKEDCGQPGFTLAERARFGTILREGKLVDAYRFLHKNKDMEQGFSWSGNPIGRYRGKRMRIDYFLVSEKLEEKIVACDMLGQGIELKGFYGSDHCPVTLELSPSSNSQNEDPV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3277 364 MobiDBLite consensus disorder prediction 1 40 - -
Psa5g3277 364 CDD Ape1-like_AP-endo 41 352 - -
Psa5g3277 364 Pfam Endonuclease/Exonuclease/phosphatase family 44 345 IPR005135 GO:0003824
Psa5g3277 364 Gene3D Endonuclease/exonuclease/phosphatase 5 354 IPR036691 -
Psa5g3277 364 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 29 356 - -
Psa5g3277 364 MobiDBLite consensus disorder prediction 84 106 - -
Psa5g3277 364 SUPERFAMILY DNase I-like 41 352 IPR036691 -
Psa5g3277 364 TIGRFAM xth: exodeoxyribonuclease III (xth) 41 352 IPR004808 GO:0004518|GO:0006281
Psa5g3277 364 PANTHER AP ENDONUCLEASE 29 356 IPR004808 GO:0004518|GO:0006281
Psa5g3277 364 Coils Coil 13 39 - -
Psa5g3277 364 MobiDBLite consensus disorder prediction 1 39 - -
Psa5g3277 364 ProSiteProfiles AP endonucleases family 1 profile. 41 354 IPR004808 GO:0004518|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3277 - - gmx:100817167 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3277 5 256221060 256231919 Psa5g3277 5 256221060 256231919 ECH