Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3229 ATGGAGGCCACTTCTGAGTCTTCCGACCCCAAAGCCGTTAATCTTCCCGTCATTGATCTCCGCCTTGTATCTCAATCGGAGCTATACACTATCTCCCTTTCGCACGCTACCGGCTGTAACCGTCGCATCGACGAAGATTGCGTTATCCCTAAAATTGACCGTTCGGTTTTCAAAGAGTCCACCGGTAGCCGGAAACAGACGTTCTCTCGTCTCCGTCTGTTTCCTCGTAACAACAATAACCCGTATTCTCCCGTTCCTGCTGCTGTCGCTCCTGTTGCTGTTGTTCCCGCTCCTTCGTCTTCGTCTTCCCGCATTGCCGCTGACGGAGAGAATTCCCAAATAATCGATCTCCTGCAACAACTATTCGGCGTTGAACCTCTCCGCGGCGCGTATAATGATCATGCTGTTCCGTTGCAAGTTGAGTTCAAACAACCGGCTCTTGAATTTACGCCTCAGGCTGTTCAGAATGTTCCGATTGATGGTAGTCAGACAAAGCGGAAGCGCGGAAGGCCTCGCAGGAGCGAGACTCCGGGCAGTGAGGCTCTTTTAGCCATTTGCGATGGTAATGGGAAGGCGATGGAAACGGATGATGAGAAGAAGGTAGAAACTGTTAATGGCAAGAAGAAGAAGGTGGAAACGGAAAATGAGAAGAAAGTGGAAGCGGCTAAGGAAAAGCAGGGGTTTGTTCTGGAGGATGCTGGGGATCCATTTGTGGAGGAGTTGATTGTGAGGACACAAGGGATGAATACGGAGCCAGAGTTGCTGGAGTTTTTGGAGGGTTTGAATGGAGTTTGGGGAAGTGATAGGAAGAAGAGGAGGATTGTTGATGCTAGTTGTCTCCGTGATGTGCTGCCAACTGGATGGAAACTCATACTTACTCTTCAGAGGAGAGGGAGTCGTGCATCGGTGTTATGTCGCCGATACGTAAGCCCTGACGGAGGCCAGTTTGAGACATACAAGGATGTTTCTTCATACTTGGTTTCTTTGTTCAATGTTCAAGATGCGGGCGAGTTAAAATCTTGTTATACTGATGGTAGTAAGCAGTTCTCCAGTAATATCAATATATCTGAAAATATTATTGGTCACGTCCTTACAGGCGGCATTAAGATCGATGCCAATGAAAGTTCTCATCATGAGAAGCAGACCACCATATCATCACCAATTGGAGCTGAAAAGCGAAACACTTCTGATGGGAAATTAAATGGTGACCTGGAAGCTATGGATTGTGAACTAGGTGATGCCACCAATGGAGCCTTTAGAGTCTCTGACCATCCAACTGACGATAAGCTACCACTGAAGGCAGATAAGAAAGATGCAAACTCAGTTCAGGAATCCTTTCTTTCAGAGGACAGAGTTTATAATCAGAGTGTTGGTCCCATCCCTACATGTGGCATGAAGATTGATGCCAATACAAGTTCTCATCAGAGGCAGGCCACCTTGTCATCATCAATTGGAGCTGGATGCTATAAAACTGTTCCCTATGGAAATGAGCAAGTACGTGTTGGTGACAACGGGCTTGGGCTTTCCGCCACATTAATGGAAAACCACATTCAGAAAATAGCTTCTGAAAGCAGCATGCTGGTTCCAAATTCTCAAGATATTTCTACTAATGGTAAACTTCAGTTTTGTCCAGAAGGCTCTTTTGTCCCATCCCAGAATGAACTTAACCATACATCTATAGAGAGTATGGATAGGGAACAAACTTTTGAGCTGAAGGACTCTGCTGGGGCAAAAAAAAATTATAATGATTTACCTGGCTCGTCCACTGATGAGAAAACATGGGATCACAATGATGAATATATGGATAATATTTCTTTTGATCCCTGGCAACAAGATGCACCTGTGTCTGATGTAATTGATTTTACTCCCAATCTTTATGTAACTAATGGTGTTAGTGATGATCATGCTCTTCCATTGGACGAAGTTGCGACAAGCTCTTTACAAAAAATGAGTTCTCTGAATGACCAAATTTGCACAATGGACAATCTGTTGCACAGAAGGTCTGAAAGTAACTTATTTACCGTAGCCGGGAGTCAGCCCCCTTCTGCCCTCCATGATAATATGAATAACATCTCAGCTGGAGCCTTTGGTGCAGTCAAACATGTTGATGCATCTCCTAGGGTCTTGCAGGGGGGATCACAATCTGTTTCTCCTGGTGGAAATATGTTAAACCAGTTTGACAAGAAAAATGATGATGGAGTTAATAATGGAAATACCTCTTGCTTATCAGGTATTCACAAATAG 2244 0.4479 MEATSESSDPKAVNLPVIDLRLVSQSELYTISLSHATGCNRRIDEDCVIPKIDRSVFKESTGSRKQTFSRLRLFPRNNNNPYSPVPAAVAPVAVVPAPSSSSSRIAADGENSQIIDLLQQLFGVEPLRGAYNDHAVPLQVEFKQPALEFTPQAVQNVPIDGSQTKRKRGRPRRSETPGSEALLAICDGNGKAMETDDEKKVETVNGKKKKVETENEKKVEAAKEKQGFVLEDAGDPFVEELIVRTQGMNTEPELLEFLEGLNGVWGSDRKKRRIVDASCLRDVLPTGWKLILTLQRRGSRASVLCRRYVSPDGGQFETYKDVSSYLVSLFNVQDAGELKSCYTDGSKQFSSNINISENIIGHVLTGGIKIDANESSHHEKQTTISSPIGAEKRNTSDGKLNGDLEAMDCELGDATNGAFRVSDHPTDDKLPLKADKKDANSVQESFLSEDRVYNQSVGPIPTCGMKIDANTSSHQRQATLSSSIGAGCYKTVPYGNEQVRVGDNGLGLSATLMENHIQKIASESSMLVPNSQDISTNGKLQFCPEGSFVPSQNELNHTSIESMDREQTFELKDSAGAKKNYNDLPGSSTDEKTWDHNDEYMDNISFDPWQQDAPVSDVIDFTPNLYVTNGVSDDHALPLDEVATSSLQKMSSLNDQICTMDNLLHRRSESNLFTVAGSQPPSALHDNMNNISAGAFGAVKHVDASPRVLQGGSQSVSPGGNMLNQFDKKNDDGVNNGNTSCLSGIHK* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3229 747 MobiDBLite consensus disorder prediction 725 747 - -
Psa5g3229 747 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 394 IPR037472 -
Psa5g3229 747 Pfam Methyl-CpG binding domain 280 326 IPR001739 GO:0003677
Psa5g3229 747 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 394 - -
Psa5g3229 747 SUPERFAMILY DNA-binding domain 279 329 IPR016177 GO:0003677
Psa5g3229 747 MobiDBLite consensus disorder prediction 156 179 - -
Psa5g3229 747 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 274 356 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3229 Psa-Chr5 252848991 252854812 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3229 - - cam:101492327 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3229 5 252848991 252854812 Psa5g3229 5 252848991 252854812 ECH