Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3223 ATGGTTCGTGGTGAGAAGAGGAATATCTTTGAGGTTATTAAATCAATTGCTACTTCTCAAGGGTTGAGAGGTTTTTGGAAGGGGAACCTTCTTAATATTCTGCGAACGGCTCCGTTCAAAGCTGTTAATTTTAGTGCGTATGATACTTATCGAAAACAACTACTTAAATTCTCTGGAAATGAAGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCGGCTGCTGGGGTCACTGCTACTATTATTTGCCTGCCACTTGACACTATTCGGACCAAGATAGTGGCACCTGGCGGAGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAATACATGATTCAAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCATCAAGTGCTGTTTTTTATGGTGTATACGATATGCTAAAATCATCTTATTTGCATTCACCCGAAGGAATGCAAAGAATCCAGAATTTGCATAAACAGGGTCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGTTGTATGGGGCTATTGCCGGTGCATGTGCAGAAGCTGCTACATATCCATTCGAAGTTGTGAGAAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACATTTGTCAAAATAGTAGAACAAGGAGGCGTTTCAGCCCTCTATGCCGGACTTGTTCCCAGCTTATTACAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTCATGAAGATTGTTCTCAAAGTAGAGTGA 801 0.4107 MVRGEKRNIFEVIKSIATSQGLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLKFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGETLGGVIGAFQYMIQTEGIFSLYKGLVPSLISMAPSSAVFYGVYDMLKSSYLHSPEGMQRIQNLHKQGQELSAFDQLELGPVRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEQGGVSALYAGLVPSLLQVLPSASISYFVYEFMKIVLKVE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3223 266 Gene3D Mitochondrial carrier domain 1 264 IPR023395 -
Psa5g3223 266 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 53 IPR018108 -
Psa5g3223 266 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 5 266 - -
Psa5g3223 266 PANTHER SOLUTE CARRIER FAMILY 25 5 266 - -
Psa5g3223 266 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 262 IPR018108 -
Psa5g3223 266 SUPERFAMILY Mitochondrial carrier 6 259 IPR023395 -
Psa5g3223 266 PRINTS Mitochondrial carrier protein signature 28 48 IPR002067 GO:0055085
Psa5g3223 266 PRINTS Mitochondrial carrier protein signature 78 96 IPR002067 GO:0055085
Psa5g3223 266 PRINTS Mitochondrial carrier protein signature 121 139 IPR002067 GO:0055085
Psa5g3223 266 PRINTS Mitochondrial carrier protein signature 186 208 IPR002067 GO:0055085
Psa5g3223 266 ProSiteProfiles Solute carrier (Solcar) repeat profile. 63 148 IPR018108 -
Psa5g3223 266 Pfam Mitochondrial carrier protein 63 150 IPR018108 -
Psa5g3223 266 Pfam Mitochondrial carrier protein 177 263 IPR018108 -
Psa5g3223 266 Pfam Mitochondrial carrier protein 7 56 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3223 Psa-Chr5 252257887 252262257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3223 48 260 Organic Solute Cotransporters AT5G64970 20.188 3.07e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3223 - - gmx:100816623 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3223 5 252257887 252262257 Psa5g3223 5 252257887 252262257 ECH