Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3198 ATGGAGGAGCGGGCCTCGCCGCTGCCATCACCTCCTCCTCGAAAAGATTTTAATTCTAACCCCCAATTACCTGATATTGGCCATGGCACCTACGTTGTCCAAGTCCCTAAAGACCAAATCTACCGCATTCCACCGCCGGAAAATGCCCGTATTGCCGAGAGTCATCGGAAACCTCCCCCTAAGGAGACAAACCGGACAGGTTGTTGGTGTATTGTATTCGTCGTCTTCTTCCTCACTATTGTCATTTTGGTTGGAGGTCTTTTAGGTGGCGTTTTTTCCATGGTACTTGCACCAAAGGATCCAAAGTTTTCAATCCAACACTTTCTCTTACAAAGCAAACTACTTCCACAATATAAAATCACTATAGAAGCCTATAATCCGAATACAAATGTGGTTATTTTATATAAAGAAGGAGGAGATGTTTCCCTCTCTTTAAAAAAACAAAAAATTGCTTCAGGTGAGTACCCAACATTTTCTCAAGCCAATCAAAATTCAAAGAGTTTTGAAGTAACTTTAAAAGGTTCAACAACAAAATTACCTAAGGAAGTTGAAGAAAGCAAGAAAAATGATAAAAAGAAAGTGCGCGTCACATTTTCTTTATTAATTAATGTCCAAACCCAAATAAAATTGAGCTTGCTTCAAAGCAGGTCAATGACTTACGAGGTTACTTGTCAAGTAACCGTCGATTCATTGGCCAAAACTACAAAAGTAGTTTCTCAACAATGTGAAACTAAAGGACACTAG 744 0.3938 MEERASPLPSPPPRKDFNSNPQLPDIGHGTYVVQVPKDQIYRIPPPENARIAESHRKPPPKETNRTGCWCIVFVVFFLTIVILVGGLLGGVFSMVLAPKDPKFSIQHFLLQSKLLPQYKITIEAYNPNTNVVILYKEGGDVSLSLKKQKIASGEYPTFSQANQNSKSFEVTLKGSTTKLPKEVEESKKNDKKKVRVTFSLLINVQTQIKLSLLQSRSMTYEVTCQVTVDSLAKTTKVVSQQCETKGH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3198 247 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 19 245 - -
Psa5g3198 247 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 245 - -
Psa5g3198 247 MobiDBLite consensus disorder prediction 1 25 - -
Psa5g3198 247 Pfam Late embryogenesis abundant protein 121 205 IPR004864 -
Psa5g3198 247 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3198 Psa-Chr5 248944733 248945985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3198 29 244 EF-hand Containing Proteins AT5G21130 30.804 9.16e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3198 - - aprc:113853148 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3198 5 248944733 248945985 Psa5g3198 5 248944733 248945985 ECH