Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3182 ATGGCTACTGAAGTATGTAACCATGCTATCGGGACTTTGCAGTCTCATTCTTATCTTAGTAATCTGAATCATAGCCGAAATCTCAGGAGTGGTTCGCTAAGATTTGCGACAAAGGATTTTGTCTCTAGTAATAATGGCTTGTCAAAGGGAAGAAGTAGCCACTTCGGCCGGAGGAGTTGTTTTGTAATTCAGTCTTCGGCTTCCCATTCTCAGACGTCGGTTGTTGATCCGGTGTTGTCCCCTTCAAGAAGCAACACGGGTGACAGTTATAAGAAATCAAATGAAGCGGCTTTGATCCTTATTCGACACGGCGAGTCGTTGTGGAATGAAAAGAATTTGTTCACAGGTTGTGTTGATGTACCACTTAGCAAGAAGGGTATTGATGAGGCAATCGAAGCTGGAAAAAAGATTAGTAACATACCTGTTGATGTCATATTTACATCTGCGTTGATTCGTGCACAAATGACAGCTATGCTTGCCATGACCCAGCACCGCCGTGGGAAGGTGCCTGTTGTTTTGCACGACGAGAGCGAGCAAGCAAAAGCATGGAGTCAAGTTTTTAGCGAAGATACAAAAAAGCAGTCCATTCCAGTCACAACAGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATACGGAAAAGAGCAAGTCCATGAGTGGCGCAGAAGCTATGACATACCTCCTCCCAATGGTGAAAGTTTGGAAATGTGCGCTGAAAGAGCAGTTGCCTATTTCAGAGACCGGATTGAACCCAAACTTTTATCTGGAAAGAATGTTATGATTGCAGCACATGGGAATTCACTGAGATCCATTATCATGTATCTCGACAAGCTAACTTCCCAGGAGGTCATTAGCTTAGAACTGTCAACCGGAATTCCAATGCTTTACATATTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCTATAGGACCAACTGAAGCTGGAGTATATGCCTATACCAAGCATTTGGCTCTTTACAGACAGAAGTTGGATGAGATGTTCCAATAA 1047 0.4336 MATEVCNHAIGTLQSHSYLSNLNHSRNLRSGSLRFATKDFVSSNNGLSKGRSSHFGRRSCFVIQSSASHSQTSVVDPVLSPSRSNTGDSYKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKKISNIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPVVLHDESEQAKAWSQVFSEDTKKQSIPVTTAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDRIEPKLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTKHLALYRQKLDEMFQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3182 348 CDD HP_PGM_like 98 317 IPR013078 -
Psa5g3182 348 Gene3D - 88 321 IPR029033 -
Psa5g3182 348 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 100 109 IPR001345 GO:0003824
Psa5g3182 348 SMART PGAM_5 97 283 IPR013078 -
Psa5g3182 348 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 2 347 - -
Psa5g3182 348 SUPERFAMILY Phosphoglycerate mutase-like 98 314 IPR029033 -
Psa5g3182 348 PANTHER PHOSPHOGLYCERATE MUTASE 2 347 IPR005952 GO:0004619|GO:0006096|GO:0016868
Psa5g3182 348 Pfam Histidine phosphatase superfamily (branch 1) 193 301 IPR013078 -
Psa5g3182 348 Pfam Histidine phosphatase superfamily (branch 1) 98 175 IPR013078 -
Psa5g3182 348 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 95 322 IPR005952 GO:0004619|GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3182 Psa-Chr5 248059279 248062219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3182 K01834 - gmx:100802621 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3182 5 248059279 248062219 Psa5g3182 5 248059279 248062219 ECH