LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g3163	ATGGAAGATCAGCATTTGTTGGAGAAAAAGGAAGCTAGTTCCGAAGCGGTTGAGAAGCTGCAAGCAGATACTTCTGCCATTCAGATTGAAGATCCAGATAAAGAGGGAAAAGCTCAGAATACTGGTCATGATGGCTCTGAGTTAGATAATAAACTGGATGATGTATCGGATGCGATAAAGAATGTCAACGATGGAAAGTCTAAGGCTGATACTGATGAAAAGATAAATGATGAAGTCATTGGAGATTCTGGTTTGGCTCAGACAAAATCTGAAGTGGAAGTCAATAATGATGGGCAAGAATATTCGGGTGATGATAAGGTGGAGTCCAATAGAGATTCCGGGCCTAAAAGTGAAGAAACAAATCTAGATGATAATTCAGGACAGAATGACTTGGCTAAAGAAGAGGATGGCAATGGAGACATTGAATCCACACATATGAATCAGAAGGCAGATGAAATTCCAAGTGAGGACAACATTTTGGACCCTGTATTTGATGGAACTGAGGTTCCAGGGATGGAAGTCAACCGGAGCACATCTACTCGTAAGTTGGATGCAGATCAGGACAGTTCAGGTGTGGTTGAGAAGGCAGTAGCTCTTAAAAATTTTGTCAGGGAGAAAAGTGCCGTGGCTGTCTCCACTATGCTGCGTCGCCTTTCTGGAAAAAGTGACGATGCTTCAGTGGGTAATTTTGATGATGAAAGCAAGGATGTTTCAGATATCTCAGAAGTTAACGAATCTAAATTTGTTTCTCAGAAGTCAGTGGAGAAATCTGCCTGGAATCCCTTAAATTATATCAAGAAGTCATCTGATGTTGATGTGGATTATACTGTACCACCAATAGCCATGAAAGGAAGGATTATACTGTACACAAAACTGGGGTGCCAAGAATCTAAAATATTTAGACTATTTTTACGTACAAAAAGGCTTAGGTTTGTGGAAATCAATATAGATGTATACCCTAGTAGAAAGATGGAGCTAGAGAAGATTTCAGGATCTACCTCAGTTCCTAAGGTGTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAAAATTTAGATGAATCTGGAAGGCTTGAGGAGAAGATTGACTTTCTTGTTACTGAAGCACCGTTATTTGAAACACCATCACCACCTTTTTCTGGAGAGGATGATAATTCCAGCAGTGGGGCAGTTGATGAATTGGCTCTTATTGTTCGCAAAATGAAAGAATCTATTACTGTGAAGGACAGATTGTACAAAATGCGCAGGTTTACCAACTGTTTTCTGGGATCAGATGCTTTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGAATTTGCTCGGAAGCTTGCCAGCAAACTCTTTTTTCGACATGTGCTTGACGAGAATCTATTTGAAGATGGTAATCACGTGTATCGGTTTTTGGATGATGATCCAACTGTGGTGTCACAATGTCACAACATTTCTAGGGGCATTACTACCTTCAAACCGAAGCCTATAGCAGAAATTGCATCAAGGCTGAGAGTTCTGGCCTCTGCAATGTTTGAAGCCTATGCTTTTGAAGATGGGTGTCGTGTTGATTATACCAGTTTGCATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATAGTAGAAGAGCTCCAAAGAGTGGAAATATTGGATTTATCTAGAGAAGAGAAGCTTGCTTTCTTTATAAATCTTTATAATATGATGGCCATCCATGCAATCTTAATATTGGGTCAACCAGATGGAGCACTTGAAAGAAGGAAAATATTTGGAGAGTTCAAATATGTTATAGGTGGCTCCACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGCGGCCTCCATATAACCTTAAGAAGCCATTCGGTGCAAAAGACAAACGCTCAAAGGTGGCACTCCCTTACCCTGAGCCTCTGATTCATTTTGCTTTGGTATGTGGCACCCGATCCGGACCTGCACTTCGGTGCTATTCTCCCGGAAAAATTGACGAAGAATTATTGGATGCAGCTCGCAACTTCCTGAGAAGTGTAGGTGTTCTAATTGATTTGACTGCAAAGACTGCATATGCTAGTAAGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAGCGAGGTCGAGGTGATCAAGCATGTGTCAAACTATTTAGATCCAGCTGACTCAGAAGTATTATTGGACCTGCTTACCTCTTCTGAGTTGAAGGTGACATATCAGCCTTATGACTGGGGTTTGAACTGCTAG	2259	0.4081	MEDQHLLEKKEASSEAVEKLQADTSAIQIEDPDKEGKAQNTGHDGSELDNKLDDVSDAIKNVNDGKSKADTDEKINDEVIGDSGLAQTKSEVEVNNDGQEYSGDDKVESNRDSGPKSEETNLDDNSGQNDLAKEEDGNGDIESTHMNQKADEIPSEDNILDPVFDGTEVPGMEVNRSTSTRKLDADQDSSGVVEKAVALKNFVREKSAVAVSTMLRRLSGKSDDASVGNFDDESKDVSDISEVNESKFVSQKSVEKSAWNPLNYIKKSSDVDVDYTVPPIAMKGRIILYTKLGCQESKIFRLFLRTKRLRFVEINIDVYPSRKMELEKISGSTSVPKVFFNEILIGGLSELKNLDESGRLEEKIDFLVTEAPLFETPSPPFSGEDDNSSSGAVDELALIVRKMKESITVKDRLYKMRRFTNCFLGSDALDFLSEDQYLERPEAVEFARKLASKLFFRHVLDENLFEDGNHVYRFLDDDPTVVSQCHNISRGITTFKPKPIAEIASRLRVLASAMFEAYAFEDGCRVDYTSLHGSEEFARYLRIVEELQRVEILDLSREEKLAFFINLYNMMAIHAILILGQPDGALERRKIFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSKVALPYPEPLIHFALVCGTRSGPALRCYSPGKIDEELLDAARNFLRSVGVLIDLTAKTAYASKILKWYSIDFGKSEVEVIKHVSNYLDPADSEVLLDLLTSSELKVTYQPYDWGLNC*	753

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g3163	752	MobiDBLite	consensus disorder prediction	128	156	-	-
	Psa5g3163	752	Gene3D	-	391	482	IPR036388	-
	Psa5g3163	752	MobiDBLite	consensus disorder prediction	99	119	-	-
	Psa5g3163	752	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	1	751	-	-
	Psa5g3163	752	Pfam	Protein of unknown function, DUF547	554	680	IPR006869	-
	Psa5g3163	752	Pfam	Glutaredoxin	286	342	IPR002109	-
	Psa5g3163	752	SMART	DEP_3	403	476	IPR000591	GO:0035556
	Psa5g3163	752	MobiDBLite	consensus disorder prediction	28	79	-	-
	Psa5g3163	752	Gene3D	Glutaredoxin	281	366	-	-
	Psa5g3163	752	ProSiteProfiles	Glutaredoxin domain profile.	274	371	-	-
	Psa5g3163	752	SUPERFAMILY	"Winged helix" DNA-binding domain	395	480	IPR036390	-
	Psa5g3163	752	CDD	DEP	395	473	-	-
	Psa5g3163	752	Pfam	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	407	474	IPR000591	GO:0035556
	Psa5g3163	752	SUPERFAMILY	Thioredoxin-like	280	365	IPR036249	-
	Psa5g3163	752	MobiDBLite	consensus disorder prediction	1	160	-	-
	Psa5g3163	752	MobiDBLite	consensus disorder prediction	1	17	-	-
	Psa5g3163	752	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	1	751	-	-
	Psa5g3163	752	ProSiteProfiles	DEP domain profile.	403	476	IPR000591	GO:0035556

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g3163	Psa-Chr5	246828661	246832016	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g3163	-		-	ccaj:109797380	1092.41

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa5g3163	5	246828661	246832016	Psa5g3163	5	246828661	246832016	ECH
	Psa2g1768	2	144940461	144949580	Psa5g3163	5	246828661	246832016	PCT