Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3085 ATGATTCCGGTTGATAATGGTAATATTACAAGTCCCCGAAATGAAATTGAAGAATCTAATGGGACTCAAGTGAAGGAGTTTGCTTCTCTAGATATTTCAACCCCTAATGAGAAAGACCTTATTTCACAGTCTCTACCTTCTCCTTCTCCGCATTCCAATGGTCTAAAATCGCGTTTACGTCTGATGTTTGCTCAAAAACTTGAATGGAGTTCAGTCAAGAAAATGTGCTTGGAATGGATCAAGAACCCGATGAACATGGCCCTTTTCGCGTGGATAGTTTGCGTCGCTGTTTCGGGTGCAATTCTGTTCTTTGTCATGACAGGAATGTTGAATAATGTGCTAAAAACTAAGTCGGAGAGGAACACATGGTTTGAGATAAATAACCAGATACTTAATGCACTCTTTACACTTATGTGTTTGTATCAACATCCGAAGAGGCTCCACCATCTTGTTATTTTGTGTAGATGGAGAACAAATGACATTTCTACGCTTCGAATGATTTACTGCAAAAATGGTACTTGTAAGCCACATGAATGGAGACATATGATGGTAGTGGTTATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTTGTCTAAATTTAGGATACACAAGGTCTCAGCGACCTGCGGTTGGAGTTGGAATTACTATATCAGTTGCAATTGCGTCACCGGCCATAGCTGGATTGTACATTATTCTTAGTCCACTAGGGAAGGACTATGATTGTGAGATGGATGAAGAATCACGAGATCAAATTCCGAAACCGTTTGAGAAAAGGTATGCCTTTGCATCTAAGGATCAACAGGGAGAAGTTATAGAATTAGAAAATAGACCGAATTGGAGTGGAGGAATACTTGAGATATGGCATGATATATCTGTATCATTTCTCTCACTTTTCTGCATTTTTTGCGTGTTTGGTTGGAACATGGAGAGACTTGGATTCGGGAACATGTATGTTCATATAGCTACTTTTATGCTGTTATGTATGGCTCCTTTTTGGGTATTTGTATTAGCTTCCGGTAACATTGATGATGATAATGTTAGAATAGCTTTAATAGCTACTGGAATCATCCTTTGTTTTTGTGGCTTACTTTATGGTGGCTTTTGGAGGATTCAAATGAGAAAGAGGTTCAATTTGCCTGCATACGATTTCTGTTTTGGAAAACCATCAGTTTCTGATTGTACACTTTGGTTATTCTGTTGTTGGTGCTCTCTTGCTCAAGAAACTAGGACTGGGAATAGTTATGATATCTTGGAAGACAAGTTATGTTTGAAAGAAATTGATACTTGTGATCAAGTTTCAATTTCAACTTTGGACAGAGAAGATGTAGTAGTATCAACCAAATCTGGTACAAGTTTTACTCTTGAAGGAGGTAAAGATGGAACAATGACTCCACCAACTCCGTCATCAGTACAAAAAGAAGATCATTAG 1440 0.3812 MIPVDNGNITSPRNEIEESNGTQVKEFASLDISTPNEKDLISQSLPSPSPHSNGLKSRLRLMFAQKLEWSSVKKMCLEWIKNPMNMALFAWIVCVAVSGAILFFVMTGMLNNVLKTKSERNTWFEINNQILNALFTLMCLYQHPKRLHHLVILCRWRTNDISTLRMIYCKNGTCKPHEWRHMMVVVILLHVNCFAQYALCCLNLGYTRSQRPAVGVGITISVAIASPAIAGLYIILSPLGKDYDCEMDEESRDQIPKPFEKRYAFASKDQQGEVIELENRPNWSGGILEIWHDISVSFLSLFCIFCVFGWNMERLGFGNMYVHIATFMLLCMAPFWVFVLASGNIDDDNVRIALIATGIILCFCGLLYGGFWRIQMRKRFNLPAYDFCFGKPSVSDCTLWLFCCWCSLAQETRTGNSYDILEDKLCLKEIDTCDQVSISTLDREDVVVSTKSGTSFTLEGGKDGTMTPPTPSSVQKEDH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3085 479 MobiDBLite consensus disorder prediction 459 473 - -
Psa5g3085 479 MobiDBLite consensus disorder prediction 459 479 - -
Psa5g3085 479 MobiDBLite consensus disorder prediction 1 20 - -
Psa5g3085 479 Pfam Protein of unknown function (DUF2985) 78 156 IPR021369 -
Psa5g3085 479 Pfam PLAC8 family 283 413 IPR006461 -
Psa5g3085 479 PANTHER - 36 455 - -
Psa5g3085 479 PANTHER PLAC8 FAMILY PROTEIN-RELATED 36 455 - -
Psa5g3085 479 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 282 414 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3085 Psa-Chr5 238287730 238290164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3085 - - mtr:MTR_3g072070 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3085 5 238287730 238290164 Psa2g0679 2 38100884 38103533 ECH
Psa5g3085 5 238287730 238290164 Psa5g3085 5 238287730 238290164 ECH
Psa5g3085 5 238287730 238290164 Psa2g0679 2 38100884 38103533 PCT