Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3083 ATGCAGGTTCCAGTAGATTCTTGTTATATTGCTTCAAGCAATTCAAGCAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGCATATATTATAAGCCTCCCCAATTGGATGGGCTTTTTCAATATCTTTCAGCAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTAAGGCTTCCTAAATCTCTGGGTGTGGATTTCCGTGCCTCGTGTTTCTGCCATAAGAAAACAATCGACACGGGCTATGTATGTTCTGTATGCTTATCCATATTCTGTGAGCATCACGACAAGTGTTCAACTTGTAGCTCTGTTTTTGGCCAGTCTCAATCTGTTGTCGCCTCAACAGACAATCGGAAAAGGAAGGCTGAATAA 378 0.418 MQVPVDSCYIASSNSSNSAFLQQASYITGGIYYKPPQLDGLFQYLSAVFATDLHSRAFLRLPKSLGVDFRASCFCHKKTIDTGYVCSVCLSIFCEHHDKCSTCSSVFGQSQSVVASTDNRKRKAE* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3083 125 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 2 112 IPR004600 GO:0000439|GO:0006289|GO:0006355
Psa5g3083 125 Gene3D von Willebrand factor, type A domain 1 52 IPR036465 -
Psa5g3083 125 Pfam Transcription factor Tfb4 1 103 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3083 K03143 - gmx:100810574 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3083 5 238115374 238119418 Psa5g3083 5 238115374 238119418 ECH