Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3080 ATGTCATCTTCCAAAAGTCTGAAAATTGGCATTGTTGGGTTCGGTACATTTGGTCAATTTCTGGCAAATACAATGATCAAACAAGGCCATACTCTAACTGCAACTTCAAGAACAGATTACTCTCAACTTTGTCTCCAGATGGGTATCCATTTCTTCAGGGATGTGACAGCATTACTTGAGGCTGACATGGATGTCATACTGTTATGCACATCTATTTCGTCGCTGTCGGAGGTGGTCGGGTCAATGCCACTCACTTGTCTGAAACGTCCGACGCTATTTGTTGATGTTCTTTCGGTTAAAGAGCACCCAAGGAACCTTCTTTTGAGAGTTCTGCCAGAGGAGTTAGACATACTCTGCACACACCCAATGTTTGGACCAGTGAGTGGGAAAAATGGATGGCAAAATCTTACTTTCATGTATGACAGAGTTCGAATAAACGATGAAGCTACCTGCTCTAAATTTCTCCAAATTTTTTCAAGTGAGGGTTGCAAGATGGTAGAAATGTCATGTGAGGAACATGATAGAGCAGCTGCAAAGAGCCAATTTATCACACACACAATCGGCAGGACATTGGCAGAAATGGATATTGAACCTACACCTATTGACACCAAGGGCTTTCAGGCACTTGTTCAGTTGAAAGAACCTGTCATGGGATGCAGTTTTGATTTGTATAGTGGATTATTTGTGCACAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAGCATGCCCTACATAAAGTCAAAGAGATGCTGGTCCAAAGGATGGATGAAGGACAAAACTCAAAAAGAACTGAAAGTTGA 804 0.4216 MSSSKSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRTDYSQLCLQMGIHFFRDVTALLEADMDVILLCTSISSLSEVVGSMPLTCLKRPTLFVDVLSVKEHPRNLLLRVLPEELDILCTHPMFGPVSGKNGWQNLTFMYDRVRINDEATCSKFLQIFSSEGCKMVEMSCEEHDRAAAKSQFITHTIGRTLAEMDIEPTPIDTKGFQALVQLKEPVMGCSFDLYSGLFVHNRFARQELENLEHALHKVKEMLVQRMDEGQNSKRTES* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3080 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 168 IPR036291 -
Psa5g3080 267 Coils Coil 231 258 - -
Psa5g3080 267 Gene3D - 1 174 - -
Psa5g3080 267 Pfam Prephenate dehydrogenase, nucleotide-binding domain 43 131 IPR046826 -
Psa5g3080 267 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 4 264 - -
Psa5g3080 267 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 7 267 IPR003099 GO:0004665|GO:0006571|GO:0008977
Psa5g3080 267 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 254 IPR008927 -
Psa5g3080 267 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 264 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3080 Psa-Chr5 237963382 237965633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3080 K15227 - gmx:100787362 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3080 5 237963382 237965633 Psa5g3080 5 237963382 237965633 ECH