Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3038 ATGGCGAATGTTGATGAACTCTTATCTTCCATATTCTCAGATATAAACACCTACACCGGAAAAGACCCTCTTCTTCCTTGGCTTCGAGGAATCAGAAAGTTAAAGGATAATCTTCCCTCACAAACCCTCAAGGAAAAACTTCCAGAATTCTTGCAGAAATGCGCCCAAACATTCGAGCTCGATCGACGCTACAAAAATGACTTACGCTATATTCGCGTTTGGCTCCAATTGATGGATTTTGTTGATGACCCGAGTGCGTTACTGAGAACCATGGGTGTTAATTATATTGGAATAAAACGTTGTCAATTCTATCAAGCATATGCTCTTTACTATGAGAAGAATAAGAAGTATGATGAAGCAGAAAAAATGTATCATTTGGGAGCTAAGAACCTTGCAGAGCCCGTGGATGAAATGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAGCGTAAGAAGAAAATTCAGGAAATGAGAGGTTCTGATAGACATGTAAAGGCTAAAAATGATGAGAACAAGAGATTCCGTGGTGATCATACAGTTGTATTCAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCTGAGGCAGAAAATGCATGTCATAATGGACTAGTTGATCCTACAATAAATATGAAGGAGGCTATGAATGACATTAATAGCATGTTCAGTGAGCCACTGGAGACTGTTCCTTTGGCAAGGAAATCACATAAAAACGAATCAAAAGAACGCAGTACAAAAAACAACTTTGAAGTTTTTGTAGATGAAAACTTGGACAATGGAATCAAACCAAGTGGTTCCTCATCGCATCAGCAAAGGACTGAAGCTGGCAAGCCTCACCAAGAATCATTCCAGATATATATTGATGATGAAGGACGTTCTGAAGGTTCTACTTCATCGGCTTCAAAAGTAAATAGCTCTGTTTTCCCCCGACCTAAGGACGTTCCTTCTGAAAAATCTAGTGATATGGATGCAAAAAGATCCCGGAATTCAAAGTTCAGAGAGGATACGGTTGTTCGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAAAGGTGGAAAATGTTTGTCACAATGGTTTAGTAGACCCTACAGTCAACATGAAGGAAGCAATGAATGACATAAATAACATGTTTGGGGAGCCAATAGATTTTGTAAGGAGAAAAAGATCAGTGAAGGAGGAGAAGGCACCGGTGAACAACAGCGGAAAGGAACTCTGTGGGTTTTCAATCCTTGCTGATGAAGATGATGACCTTGAGCAGAAACAACATCCTCCACTACCAAAATTGTTGAGGAAGTCAAAGGAATCTGATTTGTTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACAAGATGTTTAATATGCCTCTGAATATTTAG 1392 0.3958 MANVDELLSSIFSDINTYTGKDPLLPWLRGIRKLKDNLPSQTLKEKLPEFLQKCAQTFELDRRYKNDLRYIRVWLQLMDFVDDPSALLRTMGVNYIGIKRCQFYQAYALYYEKNKKYDEAEKMYHLGAKNLAEPVDEMQKSYEQFLQRMKRKKKIQEMRGSDRHVKAKNDENKRFRGDHTVVFNKFVDTAMDGKSEAENACHNGLVDPTINMKEAMNDINSMFSEPLETVPLARKSHKNESKERSTKNNFEVFVDENLDNGIKPSGSSSHQQRTEAGKPHQESFQIYIDDEGRSEGSTSSASKVNSSVFPRPKDVPSEKSSDMDAKRSRNSKFREDTVVRRFVGSAILDEPKVENVCHNGLVDPTVNMKEAMNDINNMFGEPIDFVRRKRSVKEEKAPVNNSGKELCGFSILADEDDDLEQKQHPPLPKLLRKSKESDLFEPTLHTKEAMDDINKMFNMPLNI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3038 463 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 160 462 IPR015661 GO:0007094
Psa5g3038 463 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 160 IPR015661 GO:0007094
Psa5g3038 463 SMART mad3_bub1_i 4 128 IPR013212 -
Psa5g3038 463 MobiDBLite consensus disorder prediction 292 331 - -
Psa5g3038 463 MobiDBLite consensus disorder prediction 315 331 - -
Psa5g3038 463 ProSiteProfiles BUB1 N-terminal domain profile. 11 177 IPR013212 -
Psa5g3038 463 PANTHER OS11G0128700 PROTEIN 160 462 - -
Psa5g3038 463 PANTHER OS11G0128700 PROTEIN 4 160 - -
Psa5g3038 463 Gene3D - 10 167 - -
Psa5g3038 463 MobiDBLite consensus disorder prediction 292 307 - -
Psa5g3038 463 Pfam Mad3/BUB1 homology region 1 13 127 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3038 Psa-Chr5 234823220 234827092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3038 - - mtr:MTR_3g071460 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3038 5 234823220 234827092 Psa5g3038 5 234823220 234827092 ECH