Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3017 ATGTTGAAAAGCCAAACAGAATGGCCTGAGCCAATAATCAGAGTTCAATCTTTATCTGAAGGATGCATAGATTCAATTCCTGATAGATATATCAAGCCTCCAACTGATAGGCCATTTGTAAACTCTTCTTCTTCTTATGATAATGATGATGATATCAATATCCCTATCATCGACCTAGGAGGTTTATATGGCAATGATTCCGATGTTCGAGCTTCGATAATGAATCAAATTTCCGATGCTTGTCGTGATTGGGGTTTCTTCCAAATCGTAAACCATGGAGTGAGTCATGATTTGATGGATAAAGCTAGAGAAACATGGCGCGAATTCTTTCACATGCCTATGGAGGTTAAGCAACAATATGCAAACTCTCCGACAACGTATGAAGGGTATGGGAGTAGGCTTGGTGTTGAGAAAGGTGCTATTCTTGATTGGAGTGATTACTATTTTATGCACTATCTTCCCTTTACACTTAAGGATTACAACAAATGGCCTTCTTCTCCTCCGTCTTGCAGGGAAGTTTTTGACGAGTACGGTGAAGAGTTAGTGAAACTAAGTGGGAGATTAATGAAGATATTGTCGAAAAACCTTGGATTAGAAGAAAAAGTGGTTGAAAATGCATTTGGGGGAGAAGAGGTAGGAGCATGCATGAGAGTGAATTTTTATCCGAAATGTCCAAGGCCAGAATTGACATTAGGTTTATCATCACACTCAGACCCAGGAGGGATGACTATGTTGCTTCCAGATGATCAAGTGGCAGGTCTTCAAGTTCGAAAATTTGATAATTGGATTACGGTCAATCCTGCTAAACATGCCTTCATCGTCAACATTGGTGACCAAATACAGGTTCTAAGCAATGCAATGTACAAGAGTGTGGAGCACAGAGTGATTGTGAATTCAGACAAAGAGAGAGTTTCTCTTGCTTTCTTCTATAACCCCAAAAGTGATATACCCATTGAGCCATTAAAACAGCTTCTAACTCCTGAAACACCTGCACTCTATCCACCAATGACCTTTGATGAATACCGACTCTTCATTAGAATGAGAGGACCTCGTGGCAAATCTCAAGTTGAGTCCATGAAATCTCCTAGATAA 1092 0.4002 MLKSQTEWPEPIIRVQSLSEGCIDSIPDRYIKPPTDRPFVNSSSSYDNDDDINIPIIDLGGLYGNDSDVRASIMNQISDACRDWGFFQIVNHGVSHDLMDKARETWREFFHMPMEVKQQYANSPTTYEGYGSRLGVEKGAILDWSDYYFMHYLPFTLKDYNKWPSSPPSCREVFDEYGEELVKLSGRLMKILSKNLGLEEKVVENAFGGEEVGACMRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRKFDNWITVNPAKHAFIVNIGDQIQVLSNAMYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPLKQLLTPETPALYPPMTFDEYRLFIRMRGPRGKSQVESMKSPR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3017 363 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 360 - -
Psa5g3017 363 SUPERFAMILY Clavaminate synthase-like 12 347 - -
Psa5g3017 363 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 211 312 IPR005123 -
Psa5g3017 363 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 165 IPR026992 -
Psa5g3017 363 Gene3D - 11 346 IPR027443 -
Psa5g3017 363 PRINTS Isopenicillin N synthase signature 77 94 - -
Psa5g3017 363 PRINTS Isopenicillin N synthase signature 272 298 - -
Psa5g3017 363 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 360 - -
Psa5g3017 363 Pfam 2OG-Fe(II) oxygenase superfamily 214 312 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3017 Psa-Chr5 232795808 232800997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3017 15 360 Glycosyltransferase AT5G59530 30.595 4.89e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3017 - - gmx:100814471 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3017 5 232795808 232800997 Psa2g0759 2 46562793 46566148 ECH
Psa5g3017 5 232795808 232800997 Psa5g3017 5 232795808 232800997 ECH