Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2989 ATGAGGATGACAGTGGAGCCAAGCTACTCCCCAAGCCCAACTCCCAAAGAAGAACTCGAATGGCTCCCACTACCAAAACACCCTCTCTTCACCACCACCATCTCTCACGACGCTACCGGCAACGTTTCCCGAAACCTACTAGCTTGGGACGGAGCCAATCGTCTCTATTTCTGGGACCCCCACAATAACCGCCTTCATCGTTTATCTCTCCGCCTCGGTGATCCTGATCCTACTTCCGTTCTCGCCGCTTCTCCCTCTAAGGTGTTGCAAACAGATGTTGTGCTCGATTTTGATGTGCACAAAATCTCCATCAATAGGAATGGAACAGCGATACTTCTTTTTGGTTCTGAAAAACTCTGTGTTATGTATCTATATGGACGCACATCCAAGAAGGATGTAAATTTGATTTGCAGGACCATTGCTGTTGGTTCTCAGACACATTCCCTTGGAAACAATGATATTCGTGTATTGGAAGCGTCATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGACTCAGTTTTTAGGCTTTTCAATCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATACTATTTACAGCCTGCTGTGCATGGTAGATCCAGAACTGCCTCATCAATGTGTCCAGTTGGTTTTTCTTTTGGGGGAGATCATTTGTGGGACAGGTTTAGTGTTTTTGTTGCATTCAGTGACGGGTCTATCTATGTAATTTGCCCTGTTGTTCCATTTGGAAGTCTATTCAAATGTGAATCTTTATTAGACATATACAATGACGCACATACATTTGGGCTAATGTCAGCCAACTCTGTAGCGGCTAGTAATTCAAAGTTGGCAATCTCCTGGCTAGAAGCAACATTTCCTGAGTTACAGAACCAAGAAAGTGAAGGAGACAACTTATCTTTGCTAAGATCTCATGCTTATGTAGTATTTGACGCATCTCTTGTCTTGCAGGGACCTCTGCAAAGAGTAGGTCAGAGTGGAAATGGAGATTCAGTTGGTCGCAGTGCTGAATGTGAGGGTCGTGCAGTTAGTTTTCTCTACAATTCAGTTAGCAAAGATTCTATCTTGGTGACTGCCTGGAGTGGGGGGCAATTACAGATAGATGCTCTAGCTGATGAGATCCAACCTGTCTGGAGTATTGGTAGTCCACCTCGTCTTCGTCTTGACTCCCATGACGAAATACTTGGCCTTGCTATGATCTGTGAGTCAACTGCCAGCAGTCCCCCGGAGAAACTTGATCATAATAATGCCTGGTTGGGTAATCCATCCCCTCTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGCAGAAAGGGGTTATAATATTTCATTGTTCATTGATACCCTCATGCCAGAGAGAATATATTCCATTCATGATGGAGGGATTGACTCAATAGTGTTGCATTGTCTTCCATTTACAAGTCAGGCAAATGGAAAGGATGATACAATGAGGACACCTTCTGTACATCCTGTTCTAAATACATGTCAGAATGGATCCACTTCAGAGCCTTCACTTTGTGGTTTTGTGTCATTGTCTGATTCATTTGGATATTCCTGGAGTGTGGCTGTTACTCTTTCTCAAGAATGTGTTGTGCTTGAGATGAAAACTTGGAACCTTTTGCCTCAATTAAGCATCGATATGGAGAAGAAGCACATTCAATCAGTGGGGCAATCAAATGAGAGAGATATTCAACCAATAATTAGCAAAGAACTGCTTAGTGGGCCCAAGGAGGTACTTGTTCCTTGGGCCTCTCAAAGTTTACGCTCAGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTGCATCAGTATTTCAAGCTATTTCATGAGACTTATGTGGAATATGCTCATAAGGTGCACCTGGAACTCAAGCATCATGCACCTCAGTTGAAGAAAATCATTAGTGACCAACGTTCTCGATTAGGTGATGCACAGCAGAAACTTTTGAAAGTTGAAGATAAAGAGTGTATATTACAGAAAAGAATTGATCGTGCAATTCAAATGCACAATTCTTTGGAAGAGCGCTTACAACATTTAAGGAACTTACCTGGTGCTCACAAAAAACCATTGTCTAGAGCAGAGCGACAGTTTAAGTCTGAACTTGATCACTTCAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGAAGCGGTAAGTGCCAGACTGAGAAGGCACATGCAAGCTTCGAAAGCTATTCAACAGAAGAAAATATCAGGGAAGAAAGTTTGTGCTGGAAATGATCAGATATCAATACTCAAATCATCACTTGAAAAACTGTCACTTGTAAATACTGAAAATTCGAAGAAAGTTAAGATTGTTGAATCCACATTGAGTAACAAAGAAAGAAACAGCGGAGAATCAAGTCTGCCTATGCTTAAAAACTGTTAG 2412 0.4245 MRMTVEPSYSPSPTPKEELEWLPLPKHPLFTTTISHDATGNVSRNLLAWDGANRLYFWDPHNNRLHRLSLRLGDPDPTSVLAASPSKVLQTDVVLDFDVHKISINRNGTAILLFGSEKLCVMYLYGRTSKKDVNLICRTIAVGSQTHSLGNNDIRVLEASWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPAVHGRSRTASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVICPVVPFGSLFKCESLLDIYNDAHTFGLMSANSVAASNSKLAISWLEATFPELQNQESEGDNLSLLRSHAYVVFDASLVLQGPLQRVGQSGNGDSVGRSAECEGRAVSFLYNSVSKDSILVTAWSGGQLQIDALADEIQPVWSIGSPPRLRLDSHDEILGLAMICESTASSPPEKLDHNNAWLGNPSPLLRLAIVDLALPRRAAERGYNISLFIDTLMPERIYSIHDGGIDSIVLHCLPFTSQANGKDDTMRTPSVHPVLNTCQNGSTSEPSLCGFVSLSDSFGYSWSVAVTLSQECVVLEMKTWNLLPQLSIDMEKKHIQSVGQSNERDIQPIISKELLSGPKEVLVPWASQSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIISDQRSRLGDAQQKLLKVEDKECILQKRIDRAIQMHNSLEERLQHLRNLPGAHKKPLSRAERQFKSELDHFKEVELDALHSSVEAVSARLRRHMQASKAIQQKKISGKKVCAGNDQISILKSSLEKLSLVNTENSKKVKIVESTLSNKERNSGESSLPMLKNC* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2989 803 PANTHER NUCLEOPORIN NUP84-RELATED 11 789 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Psa5g2989 803 SUPERFAMILY WD40 repeat-like 43 244 IPR036322 GO:0005515
Psa5g2989 803 Coils Coil 641 661 - -
Psa5g2989 803 Coils Coil 669 689 - -
Psa5g2989 803 Pfam Nuclear pore component 24 186 IPR019321 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2989 K14318 - gmx:100801853 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2989 5 230135799 230141855 Psa5g2989 5 230135799 230141855 ECH