Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2933 ATGGAAGTCGAAAAACAGAGAGTCAAAGGTCACAAACTAGTTCTAATGCCATCACCATTTCAAGGCCACATAACACCATTACTCCAACTAGCAAACATCCTCTACTCAAAGGGCTTCTCAATCACAATCGTCCACACTGTTTTCAACTCTCCCGATCCTTCTTCCTACCCTCACTTCACTTTCCACCCTCTCCACGGTGCTTTATCGGAAACCGAAGCTTCAAAGGTAGACGCGGTTCATCTCACTGACATCATCAATATCAAATGCGTGCAGCCTTTGAAGGAATTCTTGGCTACGTTGCTGTCGTCACAGGATGATGATGATTCTGTTCCTGTCTCTTGTTTCATTGCTGATGCTGCTCTTTATTTCACTCAAAGTGTTTGTGATGAGTTCGGGATTCCTCGTCTTGTACTTAGGACTGGTGGTGCCTCTTCTTTTCTTGTTTTTGCTTCGTTTCCTCTCCTCAGAGAAAAGGGCTATTTTCCTGTTCAAGAGTCTCGATTGGAGGAAGCTGTTGTGGATCTTCCACCTCTCAAAGTGAAAGACCTTCCGGTGTTTCAGTCGAAAGAACCTGAGGCGTTTTACAAACTAGTTTGTCGCTTTATTGATGAATGCAAGAAATCGTCCGGGATTATTTGGAACACTTACGAAGAGTTGGAATCATCTGCGTTAACAAAATTGCGCCAAGATTTTTCTGTGCCAATGTATCCTATAGGCCCTTTTCACAAATACTCTCTTCCTGGATCAACTTCTACTAGCTTATTGACGCCGGATCAAAGTTGCATCACTTGGCTAGACAAACAAGAACATAAAAGTGTTGTTTATGTGAGTTTCGGGAGTATTGTAGCAATAAGCGAGGCTGAGTTCTTGGAGATAGCTTGGGGGTTAGCCAACAGCAATCAACCTTTCTTGTGGGCGATTCGACCTGGGACAATTCGCGGTTCAGAATGGCTTGAACCGTTGCCAAGTGAGTTCCTAGAGAATTTAGGAGGAAGAGGTTACATTGTGAAATGGGCTCCTCAAGAACAAGTGTTGAAGCATCCTGCAGTAGGAGCATTTTGGACACATAACGGTTGGAATTCAACTCTGGAGAGTGTATGTGAAGGTGTTCCGATGATTTGTATGCCGTCTTTTGGAGACCAAAAGGTCAATGCGAAGTATGCTAGTGATGTTTGGAAGGTTGGAGTGCAGTTAGAGAATAAGCTAGAGAGAGGAGAGATAGAGAAGATCATCAGAAAAGTAACACTTGGAGACGAAGCCAAAGAGATTAGAGAGAATGTCATGAATTTGAAGGAAAAGGCTAATGTTTGCTTGAAAGAAGGTGGTTCTTCTTATTGTTTCCTTGATTCATTGGTTAGTGAAATATTATCACTTTAA 1377 0.427 MEVEKQRVKGHKLVLMPSPFQGHITPLLQLANILYSKGFSITIVHTVFNSPDPSSYPHFTFHPLHGALSETEASKVDAVHLTDIINIKCVQPLKEFLATLLSSQDDDDSVPVSCFIADAALYFTQSVCDEFGIPRLVLRTGGASSFLVFASFPLLREKGYFPVQESRLEEAVVDLPPLKVKDLPVFQSKEPEAFYKLVCRFIDECKKSSGIIWNTYEELESSALTKLRQDFSVPMYPIGPFHKYSLPGSTSTSLLTPDQSCITWLDKQEHKSVVYVSFGSIVAISEAEFLEIAWGLANSNQPFLWAIRPGTIRGSEWLEPLPSEFLENLGGRGYIVKWAPQEQVLKHPAVGAFWTHNGWNSTLESVCEGVPMICMPSFGDQKVNAKYASDVWKVGVQLENKLERGEIEKIIRKVTLGDEAKEIRENVMNLKEKANVCLKEGGSSYCFLDSLVSEILSL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2933 458 Gene3D Glycogen Phosphorylase B; 252 436 - -
Psa5g2933 458 Gene3D Glycogen Phosphorylase B; 1 251 - -
Psa5g2933 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 430 IPR002213 GO:0008194
Psa5g2933 458 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 456 - -
Psa5g2933 458 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 7 456 - -
Psa5g2933 458 CDD GT1_Gtf-like 12 434 IPR002213 GO:0008194
Psa5g2933 458 Coils Coil 413 440 - -
Psa5g2933 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2933 Psa-Chr5 226203259 226205152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2933 9 458 Glycosyltransferase AT3G55700 50.545 7.85e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2933 - - gmx:100783133 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2933 5 226203259 226205152 Psa5g2933 5 226203259 226205152 ECH