Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2932 ATGGAGAAAAACAAGGGTCCTAGATTGTTGCTTATCCCTTTACCAGTACAAGGACACATAAACCCAATGCTTCAACTTGCACAAATCCTTCACTCAAATGCTTTTTCCATCACCATCATTCACACAAGTTTCAACTCCCTTAACCCTTCAAACTACCCTCACTTCAACTTCTGTTGCATTCAAGATGGTATATCAGAAACTGAATCCTCTACTTCAGATCTCTTGAATTTTCTCATTCAACTCAACACTAGATGTGTAAAGCCTTTCAAAGAGTGCTTAGGAAAACTACTGTCCGAGGAACCTATTGCTTGCTTGATATCAGATGCTATGTGTTATTACACTCAAGATGTTGCTACAAGCTTTAATCTTCCAAGGCTTGTTTTGAGAACTGCTGGTGCATCTTCTTTTGTTGCTTTTGCTGCTTTTCCAGTTTTAAGAGAAAAAGGGTATATACCTTTACAAGAATCTAAAATGGAAGATGAAGTGACAGAGCTACCTCCACTGAGAGTAAAAGACTTACCTATGATCAACACAAAGGAACCAGATAAATATTACGAAGTACTATACAATTCTGTCAACAAAACAAAAACCTCATTAGGAGTGATATGGAACACTTTTGAAGACTTGGAATCATCATCACTTGCAACACTAAGCCAACAATTTTCAGTTCCAATGTTTCCAATAGGCCCTTTTCACAAGCATTTCCCTACTAATAATAATACCTCTTCTTGTAGCAGCTTAATACCACAAGACCAAAATTGCATTTCATGGTTAAACAAACACAAACCAGAATCTGTTGTCTACGTGAGTCTTGGAAGTTTAGCTTCAATAACTGAGGAAGAGTTTTTGGAGATAGCTTGCGGTTTAGTCAACAGCGACCACCCGTTTTTGTGGGTGGTTCGACCGGGACTAGTCCACGGATACGAGTGGCTCGAGCCATTGCCGAGCGGGTTCGTGGAGAATATAGAAGGTAGAGGGTATATAGTGAAATGGGCACCCCAACAAGAAATTCTAGCTCATGAAGCTATTGGTTTGTTTTGGACACATAATGGTTGGAATTCAACGTTGGAGAGTATTTGTGAAGGAGTTCCTATGATATGCATGCCTTGTTTTACTGATCAAAAGGTAAATGCTAGGTATGTGAGTCATGTTTGGAAGGTTGGATTGCAATTAGAGAATGGAATGGAGAGAGGTGAAATAGAGTGGACTATTAGAAAATTGATGGAAGGAGATATTGAAGGGAAAGAGATTAGAGATAGAGCTTTGAAATTGAAGGAAGAGGCTAAGGTTTGTTTGGGACTAGGTGGTTCTTCTTGCTCTTCTTTGGAAAGGTTGGTTGCTCATATTTTATCATTGGAGTTATTTAATTTTGAAGCTTCATAG 1383 0.3883 MEKNKGPRLLLIPLPVQGHINPMLQLAQILHSNAFSITIIHTSFNSLNPSNYPHFNFCCIQDGISETESSTSDLLNFLIQLNTRCVKPFKECLGKLLSEEPIACLISDAMCYYTQDVATSFNLPRLVLRTAGASSFVAFAAFPVLREKGYIPLQESKMEDEVTELPPLRVKDLPMINTKEPDKYYEVLYNSVNKTKTSLGVIWNTFEDLESSSLATLSQQFSVPMFPIGPFHKHFPTNNNTSSCSSLIPQDQNCISWLNKHKPESVVYVSLGSLASITEEEFLEIACGLVNSDHPFLWVVRPGLVHGYEWLEPLPSGFVENIEGRGYIVKWAPQQEILAHEAIGLFWTHNGWNSTLESICEGVPMICMPCFTDQKVNARYVSHVWKVGLQLENGMERGEIEWTIRKLMEGDIEGKEIRDRALKLKEEAKVCLGLGGSSCSSLERLVAHILSLELFNFEAS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2932 460 PANTHER UDP-GLYCOSYLTRANSFERASE 76C2-LIKE 6 450 - -
Psa5g2932 460 CDD GT1_Gtf-like 7 429 IPR002213 GO:0008194
Psa5g2932 460 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 450 - -
Psa5g2932 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 92 411 IPR002213 GO:0008194
Psa5g2932 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 450 - -
Psa5g2932 460 Gene3D Glycogen Phosphorylase B; 252 431 - -
Psa5g2932 460 Gene3D Glycogen Phosphorylase B; 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2932 Psa-Chr5 226188278 226190137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2932 1 457 Glycosyltransferase AT3G55700 52.677 5.61e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2932 - - pvy:116131842 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2932 5 226188278 226190137 Psa5g2932 5 226188278 226190137 ECH